Ictalurus punctatus (channel catfish): 108262996
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Entry
108262996 CDS
T04658
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108262996 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108262996 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108262996 (srsf5a)
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
SR proteins
108262996 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
108262996
NCBI-ProteinID:
XP_017318850
Ensembl:
ENSIPUG00000003439
UniProt:
A0A2D0QN13
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGGGGGGGGGAGSRFSPRFGGYRQSRSAGSRYGPPVRTEHR
IVVENLSSRISWQDLKDLMRKVGDVTFVDAHRANKNEGVVEFASHSDMKNAIEKLNGTEL
NGRKIKLFEDRKRSRSRSRSRSSSRSRSRSRSKSASRSRSREDKRDSKREKRSRSRSRSA
SRTPEKKTSAKSESRSRSRSPTPRKQSRSRSASTESQH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtgtgtttatcggccggttgagtcctcacgcgcgggagagagacgtg
gagaaattcttcaaggggtatggacgcatccgggagatcaacctgaaaaatgggttcggc
tttgtggagtttgatgaccacagagatgcggacgacgcggtgtacgagttaaacggaaag
gagctgtgcagtgagagggtgaccattgagcacgctcgctctcgccggggtcgaggaggt
ggaggaggaggtggtggaggaggaggagcaggcagccgtttctctccacgcttcggaggc
taccgccaatcacgcagtgcaggatccaggtatgggcctcccgtgcgtacggagcacagg
attgtggtggagaatctgtcgtcccgtatcagctggcaggacctgaaggacctgatgagg
aaagtgggagacgtgacattcgtggacgctcacagagccaacaagaacgagggggtggtt
gagtttgcctcacacagcgatatgaagaacgccatcgagaagctgaatggaacagaactg
aatggccgcaaaatcaagctgtttgaggatcgaaagaggagccgcagcaggagtcgctct
cgcagctcctcccgttcccgctctcgttcacgctccaaatctgcgagtcggagccgtagc
cgcgaggacaagcgcgacagcaagcgtgagaagcgctctcgcagccgctctcgctcagcc
agtcgcacgccagagaagaaaacctctgccaagtctgagtcccgctctcgctcccgctct
ccaactcccaggaaacagtcccgctctcgctcggcctccaccgagagccagcattga
DBGET
integrated database retrieval system
