Ictalurus punctatus (channel catfish): 108263004
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Entry
108263004 CDS
T04658
Name
(RefSeq) glycine receptor subunit alpha-3 isoform X1
KO
K05195
glycine receptor alpha-3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108263004
04082 Neuroactive ligand signaling
108263004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108263004
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glycine
108263004
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
108263004
NCBI-ProteinID:
XP_017318859
Ensembl:
ENSIPUG00000002794
UniProt:
A0A2D0QKT6
LinkDB
All DBs
Position
3:complement(33764631..33834562)
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AA seq
452 aa
AA seq
DB search
MTRKRLRCVAVRGFLAWEVALLVSLVATKDPESPRGRAVPMSPSDFLDKLMGRTSGYDAR
IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDP
SMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM
DVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILKDESDLRYCTKHYNTGKF
TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS
SGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFHRRRKKLRKE
EEVREGRHSYTPNAGKDIPVAKSTNNTASNSLQAQTSANVTNKSAEEMRKLFIDRAKKID
TISRAGFPLAFLFFNIFYWILYKILRHDVHNP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaaaaggttgcggtgtgtagctgtgcggggattcctggcgtgggaagtggcg
cttttagtgagtttggtggccacaaaggaccctgaaagtcctcgggggagagccgtaccc
atgtctccgtcagactttctggacaagctcatgggaaggacctcgggctacgacgccaga
attagacccaacttcaaaggtccacctgtgaacgtgtcctgtaacatattcatcaacagt
ttcggctccatcgctgagacgacgatggattacagagtgaacatcttcctgcggcagcag
tggaacgatccacgcctggcctacagcgagtacccggatgactctcttgacctcgacccc
tccatgttagactccatctggaagccggatctgttcttcgccaacgaaaaaggtgcgcac
tttcatgaagtcaccaccgacaacaagctgctgaggatattcaagaacggcaatgtcctt
tattccataagactgaccctgacgctttcatgtccgatggatctgaagaatttccccatg
gatgtacagacatgcatcatgcagctggagagcttcggctacacgatgaacgacctgatc
tttgagtggcaggagaacggacccgtgcaggtggctgaaggactcacgcttcctcagttc
atcctgaaggacgagtctgatctcagatactgcaccaagcattacaatacaggaaagttc
acatgcatcgaggtgcgttttcacctggagaggcagatgggttattacctgatccagatg
tacatcccaagtctgctcatcgtcatcctctcctgggtgtccttctggatcaacatggat
gccgctcctgctcgcgtagctctgggcatcactacagtgctcaccatgaccacacagagc
tccggctccagaacctctctgcctaaggtctcctatgtgaaggccatagatatctggatg
gccgtgtgtttgctcttcgtgttctcggctctgctggagtacgcagcggtgaacttcgtg
tcaaggcagcacaaggagctgctgcggttccatcggaggagaaagaagttgagaaaggag
gaggaggtgcgtgaaggccgtcacagctatacccctaacgcggggaaagacatcccggtg
gccaaatccaccaataacacggcctctaactcgctccaggcccagacgagcgctaacgtc
actaacaagagtgcagaggagatgaggaagctcttcatcgaccgcgccaagaagatcgac
accatatcacgcgcaggctttcctctggccttcctcttcttcaacatcttctactggatt
ctgtacaaaatcctacgccacgacgtccacaatccctaa
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