Ictalurus punctatus (channel catfish): 108263029
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Entry
108263029 CDS
T04658
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X2
KO
K08734
DNA mismatch repair protein MLH1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03430
Mismatch repair
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108263029
03460 Fanconi anemia pathway
108263029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108263029
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108263029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108263029
NCBI-ProteinID:
XP_017318914
Ensembl:
ENSIPUG00000014319
UniProt:
A0A2D0QKY5
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Position
3:complement(9351671..9386340)
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AA seq
720 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQD
NGSGIRKEDLEIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGK
CAYRASYCDGKLKAPAKPCAGNQGTLISVEDLFYNVQTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKSFTVKKQGEMVADVKTFASASVLDNIRVLFGVALSREMMEVGCEDQKLAFKLK
GYISNANYSVKKCILILFINHRLVESCALKKAIETVYTAYLPKNTHPFLYLSLEIAPHNV
DVNVHPTKHEVHFLHEDCIIGSIQKHIESKLLGSNSSRTYFTQTLLPGLSVSVSDVKTSS
SSTADHSEHVYANQMVRTDSKAQKLDAFLQPANNLSSVPCLIASPPKLVPATADFEADIN
DGPEELLVNATHDMQINSAHVQSEAPLRKRPHVDEEKEDVTLACTPQRRVIRLTSVKELQ
NEITEQAHKGLQEILYNHSFVGCVNPQWSLVQHHTKLYLLNNTKLSQELFYQILICDFGN
FGVLWLSNPAPLYDLAILALDSEESGWTEEDGPKEGLAQYIVDFLKKKAEMLEDYFSMKI
DEEGKLTGLPLLLDNYSPSMEGLPLFILRLATEVNWDSEKDCFHDFSKECSYFYSIRREY
TLEPEAGTDLAEAEPSWQWKVEHIIFKALRSLSPPKHCSEDGSVLHIANLPDLYKVFERC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgttatccggaggctggatgagaccgttgtgaaccgcattgctgctggagaa
gtcattcaacgacctgctaatgcgattaaagaaatgattgagaactgtctggatgcaaag
tccaccaacattcaggtgattgtcaaagagggaggactgaagctgatccagattcaggat
aatggctctggaattaggaaagaagacctggaaattgtttgtgagcggtttacaacaagc
aagcttcagacttttgaggatcttgcatctatttcaacgtatggtttcagaggagaggca
cttgccagcataagtcatgtggcccatgttacaattaccacaaaaacagccgatggaaaa
tgtgcctatcgagcaagctactgtgatggaaaactgaaagccccagcaaaaccttgtgct
ggaaaccaagggacattgatctcagtagaagacctgttctataatgtacaaacccgaagg
aaagccctcaaaagccccagtgatgaatattccaggattgtggaagtagtgagtagatat
gccattcacaattctgggaaaagctttactgtcaaaaagcaaggagagatggtggctgat
gtgaagacttttgccagtgcctcagttttggacaacattcgtgtgttgtttggagtagca
ctaagcagggagatgatggaagtggggtgtgaggatcagaagcttgctttcaaactgaag
ggttatatctcaaatgctaactactcagtcaagaagtgtattctcatcctgttcatcaac
catcgtttagtggaatcctgtgccttgaagaaagcaattgagactgtctatacagcatat
cttcccaaaaacacacatccttttctctatctcagtttggaaattgcacctcataatgtt
gatgtgaatgtccatcccaccaagcatgaagtgcacttcctccatgaagattgcatcatt
ggaagcattcagaaacatattgagagtaaactacttggctccaattcctcccgcacttat
tttacacagactttacttcctgggctgtcagtatctgtcagtgatgtgaaaacctcaagc
agttcaacagctgaccacagtgagcatgtctatgccaatcaaatggtgcgaactgacagc
aaggcccaaaaactagatgcttttctacagccagcaaataacctttcttcagttccctgc
cttatagcaagtcctccaaaacttgtcccagctactgctgatttcgaagcagatattaat
gatggtcctgaggagttgctggtcaatgccacacatgacatgcagattaacagtgcacat
gtccagtcagaggctcccctaaggaaacggcctcatgttgatgaggaaaaggaggatgtg
acattggcctgtactccccagcgacgggttatcagactaactagcgtgaaggagctgcaa
aatgaaatcacagagcaagctcataaaggtttgcaggaaatactatataatcattcattt
gttggatgtgtcaatccccagtggtctctagtccaacaccacaccaaactgtacctgtta
aacaacaccaaactcagtcaggagctgttttaccagattttgatctgtgattttggtaac
ttcggagttctctggttgtcgaatccagcccctctgtatgacttggccatcttggcactg
gactcggaggagagtggctggacagaggaggatgggcctaaagaaggactggcccagtat
atagtagatttcttaaagaaaaaagctgaaatgttggaagattatttctccatgaagata
gatgaggaagggaaactgactggtctaccactgctgctggataactatagtccttcaatg
gagggtctgccattgtttatcttgcgcttagccacagaggtgaactgggacagtgagaag
gattgtttccatgacttcagcaaagagtgcagttacttctactccataagaagagagtac
acactagagccagaggcaggaacagatcttgcagaggcagaaccgagctggcagtggaag
gttgaacacattatcttcaaagcattgcgctctctcagccccccaaaacattgtagtgaa
gatggcagtgtcctccatatagccaacttgcctgacctctacaaagtgtttgagagatgt
taa
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