Ictalurus punctatus (channel catfish): 108263042
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Entry
108263042 CDS
T04658
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108263042
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108263042
04114 Oocyte meiosis
108263042
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108263042
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108263042
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108263042
03036 Chromosome and associated proteins [BR:
ipu03036
]
108263042
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108263042
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108263042
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108263042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF349
Motif
Other DBs
NCBI-GeneID:
108263042
NCBI-ProteinID:
XP_017318938
Ensembl:
ENSIPUG00000012800
UniProt:
A0A2D0QL03
LinkDB
All DBs
Position
3:11351222..11381641
Genome browser
AA seq
633 aa
AA seq
DB search
MPNKTKKEKESPKSAKASSKNSNVNAGKDTGSENSDEAQQQTASKRPSNSTPPPTQLNKI
KYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDAPPIDREELFVQKLRQCCVLFDFV
MDPLSDLKYKEVKRAGLNEMVEYITHNRDVVTECIYPEAVIMFSVNLFRTLPPSSNPTGA
EFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLSLLELFDSEDP
RERDFLKTILHRIYGKFLGLRAYIRRQINNIFYRFIYETEHHNGIAELLEILGSIINGFA
LPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSSLTEPVIMGLLKFWPKT
HSPKEVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIM
SLISDNAAKILPIMFPALYKNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEK
QKEKYKLKEREEIWHKIEQLAKQNPQITKIHPSFRHGLPPDAYIMYNENQGMPHYSMETE
TPTAEDIQLLKKTVESEATQVEQSRWCGAGEERMVEGEESVKAAGGEEEEMDTGNERYKE
GQGADATEVRAATRCVHYKGSGVPQAGRRVPDC
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataaaacgaaaaaagaaaaggaatcgccgaaatctgctaaagccagcagtaaa
aacagtaacgtcaatgctggaaaggacaccgggagtgaaaattcagatgaggcgcagcag
cagacagccagcaagcgtcccagcaacagcaccccacctccaactcagctcaacaaaatc
aagtactcaggtggtccacagatcgtcaagaaagagcgccgacagagctcttctcgcttt
aacctcagcaagaatcgtgagctgcagaagcttcctgctcttaaagatgccccgcccatc
gacagggaggagttgtttgttcagaagctgcgccagtgttgtgtactgtttgacttcgtg
atggatcctctcagtgacctgaagtacaaggaggtgaagcgtgctggactgaatgagatg
gtggagtacatcacacacaatcgtgatgtagttactgaatgcatctaccccgaggctgtc
attatgttttcagtgaacctatttaggaccctgcctccttcttctaatcctactggagca
gaatttgatcctgaggaggatgagcctacactggaagcagcttggcctcacctgcagctg
gtgtatgaattctttttacggttcttggagtcacccgatttccagcctaatatcgccaaa
aaatacattgaccaaaagtttgtattgtctctcctggagctgtttgacagcgaagacccc
agagagcgggacttcttgaaaacaattctccacaggatttatggcaagtttctgggactt
agagcgtacatccgtcgacaaatcaacaacatattctataggtttatatatgaaacagag
catcacaacggcattgcagaactcttggaaattctaggaagtataattaatggttttgcc
ctgccattgaaagaggagcacaaaatgttcctgattcgagtgctcctcccactgcacaag
gtcaagtcactcagtgtctatcacccgcagctggcatactgtgttgttcagtttttggaa
aaagacagcagtctcactgaaccggttataatgggtctcttgaagttctggcccaagacc
catagtcctaaggaggtgatgttcctgaatgagttggaggaaatcctggatgttattgag
ccttcagagtttgtaaaagttatggagcctctgtttagacagctagccaagtgtgtatca
agtccccactttcaggttgctgagcgggcactgtattactggaacaatgaatatatcatg
agtctgatcagtgacaatgctgccaaaatcctccccatcatgttccctgctctttataag
aactccaaaagtcactggaacaagacaatccatgggcttatttacaatgctctgaagctc
tttatggagatgaaccagaagctgtttgatgattgcacccagcagtacaaagccgagaag
caaaaggagaagtacaaacttaaggagagggaagagatctggcacaagattgaacagctt
gctaaacaaaatccacagattacaaagatccatccgagtttccgacatggtctgcctccg
gatgcgtatataatgtataatgaaaaccaagggatgccacactattccatggagacagag
actcccactgctgaggacatccagctgctgaagaagactgtggaatctgaggccacacag
gtagagcagagtagatggtgtggagctggagaggagaggatggttgagggtgaggagtcg
gtgaaggcagcaggtggggaagaggaggagatggatacagggaatgaaagatataaagaa
ggacaaggtgctgatgcgacggaagtcagagctgccacaagatgtgtacactataaaggc
tctggagtcccacaagcgggcagaagagtacctgactgctaa
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