Ictalurus punctatus (channel catfish): 108263054
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Entry
108263054 CDS
T04658
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108263054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108263054
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108263054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
DUF1045
Motif
Other DBs
NCBI-GeneID:
108263054
NCBI-ProteinID:
XP_017318956
Ensembl:
ENSIPUG00000002803
UniProt:
A0A2D0QMK8
LinkDB
All DBs
Position
3:17404600..17465535
Genome browser
AA seq
1852 aa
AA seq
DB search
MVEKNIYIIQGEIATVVGAIKRNSRWSTHTPLDEEQDPLLSSFSHLKETLNTIKDLSEVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEGAAEGIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKLKMRAGGMTESSKWKKQKRSPRPSRHM
VRSPSGQIDQAQLSTLSNNLSGGVPFIDQQGDGMAVLPVSDSAASSISSPTTDSGLSNCS
KTTSKEDLTDLESCSTATTPSIAASTDASMLDTQSEGRQVERTQSASVESIPEVLEDRDL
LVDQSDSASVHDMDYVNPRGVRFTQSTQREGAALIPYGLPCLRELFRFLISLTNPHDRHN
SDVMKHMGLQLLNVALEATHIAPYQSLLVLVKDELCRHLIQLLSEDRMNLYAASLRVCFL
LFESMRGHLKFQLEIYLKKLMDIITSENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY
DCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQVKVMDRAAE
QEHSETLSADGDTTVDSTTDSLTETGKALFDSNGQTAVESGVSSTCLPTSGHLMAEKMRL
GRQDQEETDSAEKKSPKKPQRFTSCLPDSQELMSIKTKKKLLITGTEQFNQKPKKGIQFL
QEKGLLSSPMDTNEVAQWLRENPRLDKKMIGEFISERNNTELLDSFVNTFAFQGLRIDEA
LRLYLEAFRLPGEAPVIHRLLETFTDNWHKVNGNPFLSNDAGFALAYAVIMLNTDQHNHN
VRKQNIPMTVEQFKKNLKGVNGGTDFDQDMLEDIYNAIKSEEIVMPDEQKGLVKENYVWS
VLLHRGATSEGIFLYVPAGSYDHDLFTMTWGPTIAALSYVFDKSLEDTIIQKAIAGFRKC
AMISAHYGFSDVFDNLIISLCKFTTLNSESVENLPTVFGSNAKAQIAAKTTFNLAHRHGD
ILREGWKNIMEAMLQLFRAELLPKSMVEVEDFVEPNGKISLQREETPANRGESAVLSFVN
WLTLSGGAEQSGQRGPSTENQEAKQSALLCIKHCDPEKLITESKFLQLESLQELMKALIS
VTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVWQTVRARLYHLCVHANESCFLVERAV
VGLLRLAIRLLRREDISSQVLLSLRLLLMMKPHVLSRVSREVAYGLHELLKTNAANIHCT
DDWYTLFTLLECIGAGVKPPAALQVTSSSPDSDTGAQSDSEVSSYHQSEVTLDRGYTSDS
EVYTEHNKPRLSRSATEVEVGWLVVGKDDLDSGKAPLAPLINQYSLTLGQDMGLHDTKSL
IKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTHEKKKSHKYDSKASRLR
KKPREKEGVSRRAKPASQRPSRSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAA
SIYSSWAEEQHHLEASGKKIEADSQTLWSSCWCPLLQGMAWLCCDARRQVRMQALTYLQR
ALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDSISPADVGGMEETRMRACTLLSKVFLQH
LSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSR
TGYSDLWEITWERIDCFLPHLREELFKQAVMPEPAPNVPVEPAPTSVTNSPSSPPVPYPA
PVPTAPTEPKTPSRPASPQEIQTPSANGNDRSSPVPPSTTPMPTPVKRSCDSPPTLTQSP
LILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLPAPRPTEPADNSEVK
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaagaatatatacatcatccaaggagagattgcaacagtggttggtgctatc
aagagaaactccagatggagcacacacacgccgctggatgaagagcaggacccacttctc
agcagtttcagtcaccttaaggagaccctcaacactatcaaagacctctctgaagtggag
cccaacgtgtttctccgacccttcttggaagttgttcgctcggaggacacaaccggacca
atcaccggccttgctctcacttctgtcaacaagttcctctcttatggcctcattgatgcc
aatcatgaaggagcagcagaggggattgagaacatggctgacgcggtcactcatgcaaga
tttgtggggacggaccctgctagtgatgaagtggtgcttatgaaaatcctccaggttttg
aggactttgttgctgactccagtgggagcccatctgacgaacgagtctgtgtgtgagatc
atgcagtcctgcttccgcatttgttttgagatgagactaagtgagctgctgaggaaatca
gccgaacacacgctggtggacatggtgcagctgctcttctccagattaccacagtttaaa
gaggaggctaaaagttttgtgggcaccaacatgaagaagctgaagatgcgtgctggtgga
atgacagaatcatccaagtggaagaaacaaaagcgttctcctcgtccctctcgtcacatg
gtgcgcagcccctccggacagatagaccaggcccagctcagcactctcagcaacaacctc
tctggtggagtgccatttattgatcaacaaggtgatggtatggcagtgctgcctgtttct
gatagtgcagcttcctccatctccagccctactacagacagtggactgtccaactgctct
aaaaccacatctaaagaagacctcacagacctggagagctgctccacagccaccactccc
agcatagcagcctccactgatgctagcatgctcgacacacagagtgagggtagacaggta
gaacgtactcagtctgcctcagtagagtccattcctgaggtgctggaggaccgagattta
ttagtagatcagtctgactctgcatctgtgcatgacatggactatgtaaatcccagagga
gtgcgcttcactcagtctacccagagagagggtgcagcgctgatcccatatggactccca
tgtctgagagagcttttccgctttcttatttctctcaccaaccctcatgaccgccacaac
tccgatgtgatgaagcacatgggtttgcagctgctcaatgtggctctggaggccacacac
atcgctccctaccagtcactgctggtcctagtcaaagatgagctctgcagacatctcata
cagttattaagtgaagaccgaatgaatttgtatgctgcttccttacgagtctgctttctg
ctgtttgagagcatgcgtggacatctcaaatttcagcttgagatttatttgaagaagcta
atggacatcattacctcagagaacccaaagatgccctatgaaatgaaggaaatggccctt
gaggcgatcgtgcagctgtggagaatcccgagctttgtgactgagctctatattaattat
gactgtgatttctactgttccaaccttttcgaggacctcacaaagctgctctccaagaat
gcttttccagtctctggtcagctctacacaactcatctcctatcacttgaagccctatta
actgtaatagacagcacagaggcccattgtcaggtcaaagtgatggacagggctgctgag
caagagcattcagaaactttatcagctgacggagataccactgttgacagtactacagat
tcattaacagagaccggcaaggctttgtttgattcaaatggacagactgcagtagagtct
ggagtgtcatcaacatgccttccaaccagtggacatctcatggctgaaaagatgagactg
ggtagacaagaccaggaggagaccgattcagctgaaaagaaaagccctaaaaagccacag
cgtttcaccagttgccttccagactcccaggaactgatgagcatcaaaacgaagaaaaag
cttcttatcacaggcacagagcagttcaatcagaagcctaagaagggtatccagtttctg
caggaaaagggccttctgagtagcccaatggacaccaatgaggtggctcagtggcttaga
gaaaacccccgactggacaagaagatgattggagaattcatcagtgaaaggaacaacact
gagttgctcgacagttttgtcaacacatttgctttccaagggctgcgtatagatgaggca
ctgcgtttgtatctagaggctttccgacttcctggcgaagcgccggtcattcatcggctc
ttggagaccttcactgacaactggcataaagtaaatgggaatcccttcttgtcaaacgat
gctggtttcgctttggcctacgcggtcattatgttgaacacggatcaacacaaccacaac
gttcgcaagcagaatatccccatgactgtggagcaattcaagaaaaatctgaaaggtgta
aatggtggtactgattttgatcaggacatgctggaagacatctacaatgccatcaagagt
gaagaaattgttatgcctgatgagcagaaaggcctggtgaaggagaactatgtgtggagt
gtgttgctacacagaggggccacttccgaggggatcttcctctatgtgcctgctggcagc
tatgatcatgacctgttcacaatgacctggggcccgacaatcgctgccctttcatacgtg
tttgacaagagcttagaggacaccattatccaaaaagccattgcaggcttcaggaaatgt
gcaatgatatcagcacactatggatttagtgatgtttttgataatttaatcatctccctt
tgcaagtttaccacactcaacagtgagtctgtagaaaacttgcccacagtttttggtagc
aatgccaaggctcagatagcagcaaagactacgtttaacctcgcccatcggcatggcgat
atcttgcgagagggatggaagaacatcatggaggctatgctgcagctcttcagggctgag
ctcttacccaaatccatggtagaggtcgaggattttgtagagcctaatggaaagatttcc
ctacagcgtgaggagacgccagcaaataggggagagtcggctgtgttaagctttgttaat
tggttgacactgagtggtggagcagagcagtccggacagcgaggaccctctactgagaat
caggaggccaaacagtctgccctgctctgtataaagcattgtgaccctgagaagctgatc
acagaaagcaagttcctacagttggaatctctgcaggagcttatgaaggcccttatctca
gtgactcctgatgaagagacctatgatgaagaagatgctgctttctgtctagagatgctg
ctgcgcatcgttctagagaatagggaccgggtgtcatgtgtgtggcagactgtgcgtgcc
cgtttgtatcacctgtgtgtgcatgccaatgagagctgcttcctggtggaaagagctgta
gttggactgctgagacttgctatacgcttgctgcgccgagaggacatcagctcacaagtg
ctgctctctttgcgcctgctcctgatgatgaagcctcacgtgttgtccagagtgagtcga
gaggttgcctatggtctacacgaactgctcaaaaccaatgctgccaacatccactgcact
gatgactggtacactctttttacactgctggagtgcatcggtgctggagtcaaacctcca
gctgcactgcaggtcaccagcagcagccctgacagtgacacaggtgcccagtctgacagt
gaagtgagctcataccaccagagtgaagtcactttggaccgaggctatacctctgactct
gaggtttacactgaacacaacaagcccagattatcccgctctgccactgaagttgaagtg
ggatggctagtggttggtaaggatgacctggacagcggtaaggcaccacttgctcctctt
attaaccagtacagtttaactttgggtcaggacatgggcctgcatgataccaagtccctc
atcaagtgtgtggagtcgctctcttttattgtacgagatgctgcacatgtcacacctgag
aactttgagctttgcgtgaaagccatccgagtgtttgtggaagccagtcttaatggaggt
tatcgcacccatgagaaaaaaaagagccacaaatacgactcaaaagctagtcggctacgg
aagaagccacgggagaaggagggtgtgtcccgacgagctaaacctgccagtcagcggccc
tcccgttctcacagtgacgatgaggaagacgagggggtgccagccagctaccatacggtg
tctttacaggttagtcaggacttgttagatctgatgcacacactgcacacacgggcagca
agtatctacagctcatgggcagaggaacagcaccatctggaggcaagtggaaagaagatt
gaagctgactctcagacactgtggtcgagctgctggtgtcctttgctccaaggtatggcc
tggctatgctgtgatgctcggaggcaggttcggatgcaggctctcacttacctccagagg
gcgctacttgtacatgatctgcaaacattggatgctgtggagtgggaatcctgtttcaac
aaggtcctgtttccgctgctgactaagctcttagacagcatcagcccagcagatgtcggg
ggcatggaggagaccagaatgagagcctgcacactgctctccaaggtgttcctccagcat
ctctcgccgctgctttctctgcccacatttgctgctctctggcttaccatcctagacttc
atggacaaatacatgcatgctggctccagtgatctactgttggaggcaatccctgagtct
ctgaagaacatgctgctggtaatggacacagctgggattttccacagtgcagactctcgt
acaggctactctgatctgtgggagatcacatgggaaaggattgactgcttcctgccccac
ctccgagaggagcttttcaaacaagctgtcatgccagaacctgcccccaatgttcctgta
gaacctgctcccacttctgttaccaattctccatcttcccctcctgtgccataccctgca
ccagtgccaactgcccccacagagccaaagacccccagcagacctgcgtctcctcaggaa
atacaaacacccagtgccaatggaaatgatagatcatctccagtgcccccctccactact
ccaatgcccactccagttaagcgctcgtgtgactccccgcccactctcactcaatctcct
ctaatactccagcccctagcctctccactgcaggtgggtgtgccccccatgacattgcca
atcattctaaatcctgccctcatagaagccacatcgcctgtacccctgcttccagcgcct
cgtccaaccgaacctgcggacaattcagaggtcaaatag
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