Ictalurus punctatus (channel catfish): 108263076
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Entry
108263076 CDS
T04658
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108263076
03036 Chromosome and associated proteins [BR:
ipu03036
]
108263076
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108263076
mRNA cycle factors
P-body specific factors
108263076
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
108263076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TACC_C
Aurora-A_bind_TACC3
Tox-REase-5
Flagellin_C
Lge1
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
108263076
NCBI-ProteinID:
XP_017319002
UniProt:
A0A2D0QKW3
LinkDB
All DBs
Position
3:101232..109304
Genome browser
AA seq
849 aa
AA seq
DB search
MSSEAVNDENRGVQLVHKHVPSDSAADIFALDQPTGRPSILRPSQAENLNKNIPKGVKVC
FQTPLRDPVTKKIMSPSRVGTMAALDDCTNSLESLMLTSPPPPSVPTKPGSSFPDDDMPI
RSKGGYTIDFDNLDCVNPFQSSGIMIPSSTQPAALLSDTLMAAEPALPASSPAPEEVETV
KERADMALDETLPFIPSVENSLADLSAGGASTDTTVIIEPKITTLADSTVNVEIPEPEPA
PVVNEDVKESLSLPKGSYQVDFDDLDSVNPFQTGSSKLQNTPPVSRKSPVCNSALSRAEE
MSSGATAPPSEPEDVLLTTERPGLTKVNPDPAAPSVAPPKEAPMLLEFHFDDEAKVERKP
PPKRLGLKKPPLSKTKTAAPKPASAPAEKKSPEIEPNAATEIPPTRGAYSVDFDQFDDPN
FNPFGAKAKMGSSPPRDAPVASQVPEQPENHTHSSPSSEAEKSAEAEPSFTEAAEEPEAL
PVAETHQPRVPVLPQKTEEPAFPCALSQSAEFDIIAADDEFVPGSMFMPSDLDGQIDYLE
QFGSSTFKESALRKQSLYLKFDPLLKESPKKAAADSSSSGFSLPRPSLAIRMMEAARSEV
RRKSQQESSKLLEDFTSPAEPAVVQDPTVLDLLVPTLKQTQKSEDMIVDMLKYTQKDLDA
ALEKAQKQAAAQIEKLTLDNQHMVLIVSEFEALIAQLTAEHKQKDELAQAELSRVLQEKQ
QLAKELSDMERSFSDVVKRLDRRKEVIDGFKKNEETLKQCAQSYLARLQKDEQRYQTLKT
HAEEKIDQANKQIAEVRAKLGSEVSALQVQLRREQLKVQSLEKNLEQKTKEVEDVTKLCD
ELIVKVQQQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagaggcggtgaacgatgagaatcggggcgttcagctcgtccacaagcacgtc
ccgtccgactcagccgctgacatttttgctctggatcagcccaccggcaggccgtccatc
ctgagaccgtctcaggccgagaaccttaacaaaaacatccctaaaggagtgaaggtgtgt
ttccagactccgctcagagacccggtcacgaagaagatcatgtccccgagtcgcgtgggc
acgatggccgcgctggacgactgcactaactcgctggagtctctcatgctcacgtcgcct
cctccacccagcgttcccactaaaccaggctcttcctttcctgacgatgacatgcccatt
cggagcaaaggaggctacaccatcgacttcgacaacctggactgtgtgaatcctttccag
agctccggtataatgatcccgtcttcaacccaacctgctgctctgctgtccgacaccctg
atggcggcggagccggctctccccgcatcgtcgccggctcccgaagaggtggaaaccgtt
aaggaaagggccgacatggctttggatgagactctcccttttatcccatctgtggagaat
tccctggcggatttatctgcgggcggtgcgtccacagacaccactgtgatcatcgagccg
aagataacgacgctcgccgacagtacggtgaacgtagagatccctgaaccggagcctgcg
cctgtagttaatgaagacgtaaaggagtcactttcactccctaaaggatcctaccaggtt
gatttcgatgacctcgactcggtgaaccctttccaaaccggtagttcgaaactccagaac
actcctcccgtctccaggaaatcacccgtctgcaattcggcactgtctcgagccgaggag
atgagctcgggagcgacggcgccgcccagcgagccagaagatgtactcctcaccacggag
aggcccggccttaccaaggtgaaccctgaccccgccgccccctcagtagcgccccctaaa
gaggctcccatgcttttggagttccactttgacgatgaggccaaagtcgaacgcaaacct
cctcccaaacgcctcggcttaaagaagccgcctctttccaaaacgaaaaccgccgctcca
aaaccagcgtctgctcccgccgagaagaaaagtccagaaatcgaacccaacgcggcgacg
gaaattcctccaacgagaggcgcttactctgttgactttgaccagttcgatgatccgaac
tttaatccattcggtgcgaaggcgaagatgggaagttctcctccgcgtgacgctccagtg
gcgagtcaagtccctgaacagccggagaaccacacacacagttctccttcctctgaagct
gaaaaatcagcagaagctgaaccatctttcactgaggcagcggaagaacccgaggcctta
ccggtcgctgaaacccaccagccccgcgttccggttcttccacagaagaccgaggagccg
gcttttccatgcgcgctgagccagagcgcagagtttgacatcattgcagcggatgatgag
tttgttcctggctccatgttcatgccgagtgacctggatggacagatcgattatctggag
cagtttggatccagcacttttaaggaatccgctctgcgtaagcagtccctctatctgaag
tttgaccctctgctgaaggagagcccaaagaaagctgcagcagacagctccagctccggg
ttcagtctgcctcgtccctctctggccatccggatgatggaggctgcgaggtcagaggtc
aggaggaaatctcagcaggaaagctcaaaactgctggaggactttacctcaccggcggag
cctgcggtggttcaggaccccaccgtgctggacctgctggtgccgacgctgaagcagacc
cagaagagcgaggacatgatcgtggacatgctgaagtacactcagaaagacctggacgct
gctctggaaaaggcccaaaaacaggcggcggctcagatcgagaagctcacgctggacaat
cagcacatggtgctgatcgtgtcggagttcgaggcactcatcgctcagctcacagccgag
cacaagcagaaggacgagctggcgcaggctgagctgagcagagtgcttcaggagaaacag
cagctggccaaagagctgagcgacatggagcgctccttctccgatgtggtcaagcgtctg
gaccgacgcaaggaagtcatcgatggcttcaagaagaacgaggagacgctgaaacagtgc
gctcagagctacttggccagactgcagaaggatgagcagcgttatcagacgctgaaaact
cacgccgaggagaaaatcgaccaggcgaataagcagatagcggaggtgcgtgctaagttg
ggatcggaggtttctgctcttcaggtgcagttgaggagagagcagctcaaagtgcagtcc
ctggagaagaacctggagcagaagacaaaggaggtggaagacgtcacaaagctctgcgat
gagctgatcgtgaaagtgcagcagcaataa
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