Ictalurus punctatus (channel catfish): 108263146
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Entry
108263146 CDS
T04658
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X4
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04114
Oocyte meiosis
ipu04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108263146
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108263146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108263146
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108263146
Factors involved in mRNA localization
Trans-acting binding proteins
108263146
mRNA cycle factors
P-body specific factors
108263146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
TFIIA
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
108263146
NCBI-ProteinID:
XP_017319132
Ensembl:
ENSIPUG00000018571
UniProt:
A0A2D0QL65
LinkDB
All DBs
Position
3:complement(25294863..25356146)
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AA seq
652 aa
AA seq
DB search
MKIHIWLQNTSYCAQQTMQDDLLMDKSKAQPHHQHQQQQQDPANVEPPSTPTPSPSEPAI
SEDSSPLSGSSQAPSVQSSKEKVAMESPILPGLGFPETGGNSLSPSFASTWSSGTANAVD
DSFFQGIPSVNGTMLFQNFPHHVNPVFGGGFSPQIGLAQSQQQQVQQQQQQQQRRSPVSP
NQAVFPQRNAYSHQAVVNSKASPSSSSSSSAWSAQQSAVWSSGSNPWSGLPAGRDPRRAV
GVGVGLPSALNPISPMKKPYPTNVIAPPKFPRAAPLTPKPWLEDNAFRTDNGNLLPFQDR
NRPFDPFNLQTLENSLMDMIRTDHDKGRMGLNFHHPAAEHIMPLTRSYGRRRGRSSLFPF
EDGFLDDAHGDQSLTPGLNSPTRCQNGERMERYSRKVFVGGLPPDIDEDEITNSFRRYGH
LVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQ
IRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPE
LKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGARCGG
KFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVSFRWS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacatatggctacaaaacacttcgtattgcgctcagcaaaccatgcaggat
gatttactgatggacaaaagcaaagctcagcctcaccaccagcaccagcagcagcagcaa
gacccagccaacgtcgagcctccttccacaccgactccctcaccgtccgagccggcgatc
tctgaggacagcagcccgttgagcgggagcagccaagcgccttcggtccaaagcagcaaa
gagaaagtagcaatggaatcaccgatcctgccgggtctgggcttcccggagaccggtggc
aactccttgtctccgtcgttcgccagcacttggtcatctggaacggcgaacgcagtggac
gatagttttttccaaggaatcccctcggtgaacggcaccatgcttttccagaacttccct
caccacgtcaacccggttttcggaggcggattttcgccgcagatcggcttggcacagtca
caacagcagcaagtacaacaacagcagcagcagcagcagaggagatctccggtcagcccc
aaccaggctgtttttcctcagcggaacgcatacagccaccaggccgtggtgaacagcaag
gcctcgccgtcttcgtcctcctcgtcgtcggcatggagcgctcagcagagcgccgtgtgg
agctccggctccaacccctggagcgggctgccggccggccgggacccgcggagagccgtc
ggtgtaggagtcggcctgccttcggctcttaaccccatctctccgatgaagaaaccctac
ccgactaatgtcatcgccccgccgaagttccccagagccgccccgcttaccccaaaaccc
tggctggaggacaacgccttcagaacggacaacggcaacctgctaccttttcaggaccgg
aatcggccctttgatccatttaacttgcaaactttggagaattccttaatggatatgata
aggactgaccacgacaaaggacgcatgggtctgaactttcaccacccagcagcagaacac
ataatgccactgaccaggagttatggtcgcagaagaggtcgctcatcactgtttcctttc
gaggatggctttttggatgatgctcatggagatcagtctctaactccagggctgaactcc
cctactcgctgtcagaacggtgagaggatggagcgttactccagaaaggtctttgttggt
ggactgcctccagacatcgatgaagatgagatcaccaatagtttccgtcgctatggacac
ctggtggtggactggccccataaagcagaaagcaagtcctactttcctcctaaaggttac
gccttcctgcttttccaggaagagagttcagttcaggccctcatcgatgcctgcattgag
gaagatggaaaactctacttgtgtgtctccagccccaccattaaagacaaaccagtccag
atccgcccgtggaatctgagtgacagtgactttgtgatggacggctcacagcctctggac
cctcgcaagaccatctttgtgggaggagtccctcgacctctgcgcgcagtggagttggcg
atgattatggaccggctgtatggaggtgtgtgctatgctggcattgatactgaccctgag
ctgaagtatcctaaaggagcaggtcgagtggccttctctaaccagcagagctacatcgct
gccatcagcgctcgattcgtccagttgcagcacaacgacatcgacaagcgggtggaggtg
aagccgtacgtgctggacgatcagatgtgtgacgagtgccagggagcgcgctgtggaggc
aagttcgccccgttcttctgtgccaacgtcacgtgcctgcagtactactgtgagtactgc
tgggccagcatccactcgcgcgccggccgcgagttccacaaaccgctggtgaaggaggga
ggagaccgaccacgccatgtctccttccgctggagctga
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