Ictalurus punctatus (channel catfish): 108263151
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Entry
108263151 CDS
T04658
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108263151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108263151
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108263151
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
HECT type E3
108263151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Glyco_hydro_129
Motif
Other DBs
NCBI-GeneID:
108263151
NCBI-ProteinID:
XP_017319149
Ensembl:
ENSIPUG00000013459
UniProt:
A0A2D0QLI2
LinkDB
All DBs
Position
3:9875648..9956946
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AA seq
996 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIIVEPRKCEFFNGKVVRGVGCGRRHTVFLLGDGTVYTCGC
NDLGQLGHDKARKKPEQVMALDAQNIVAVSCGEAHTLALSDKGQVFAWGQASDGQLGLAN
IEECMRVPRTIKSLSEVHVVQVSCGYRHSLALSRRGQIFSWGQNRYGQLGLGKEGLCILT
PQVIHSLQGIPFAQISAGGAHSFALTMSGAVFGWGRNKFGQLGLNDNKDRCFPSLLKTLR
SQRVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTLNHEVNPRKVFELMGNVVSQVA
CDAEQFYCVKRIYAGGDQSFAHCHFPQNGSPPDDLRMRHCNQHVLSLNDDLIQKWLRHGH
GRLAPEMTVEIDDVFSSASCLNGSFLSTSHPDHYHTSSKCPGVDMNMARLLFHRLIQPDY
PHISQQITSSLERHLIPNLCSSPPDIEALRLYLILPECPLFKNPNTYITLTIPFAKAVIH
LSSAPLKVLGNWWSCLDPAVFQGLVELYKEVIVYLLRMQKMGISPSEHRTFTCFLSTCLK
FLEILHTVNERAGQIIQYDKFYIHELEDLVDIRSDYVTWIQHQMFSMAMDSQVTLCKFPF
VFDAQAKTTLLQTDAVIQMQMAVDQAERQNFSSLFLPGGMVESVNPCLILMVRRENVVED
TMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYYKESRL
IWFSDKTLEDIDLFHLIGVICGLAIYNMTIVELNFPVALYKKLLKKTPTLEDLKELMPVV
GRSLQELLDYMEDDVEDAFCLNFTITVENFGETEVLELVPNGMNITVNNHNRQDFVNAYV
DYIFNSSVAPLFNAFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKNTKYKGE
YWPEHPTIKFFWDVFHELPLEKKKQFLLFLTGSDRIPILGMKSLVLVIQPTGGGENYLPV
AHTCFNLLDLPKYTSQENLKEKLLQAIEHNQGFNLA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttggggaaatgcctcctatggccagcttggattgggtggaattgatgaagag
atcatagtagagccccgcaaatgcgaattctttaatgggaaggtggtgcgaggtgtagga
tgtgggagaagacacactgtttttctgcttggagatggaactgtgtatacgtgtggctgc
aatgacctgggacagctggggcatgacaaggcacgcaaaaaaccagagcaggtaatggca
cttgatgctcagaacattgtagcagtatcttgcggtgaggctcacactcttgctctaagc
gacaaaggacaagtgtttgcatggggacaggcttctgatggacaactcggccttgccaac
attgaagaatgtatgcgtgtacccagaacaatcaagagtttgtcagaggtccatgttgtc
caggtctcctgtggttataggcattcccttgcactttctaggaggggacagattttttct
tggggacaaaataggtatgggcagttaggactggggaaagagggactttgcatcttgacc
ccacaggtcatccattctttacagggcatcccatttgcccagatctcagcaggaggtgct
cacagctttgcactcactatgtctggggctgtatttggttggggacgaaacaagtttggc
cagctgggcctaaatgataacaaagatcgatgttttccatccttactgaagacactcagg
tcacaaagggttgtttatatatgctgtggagaggatcacactgcggcattaacaaaggag
ggaggtgtgttcacatttggagcaggtggatatggccagctgggacacaacaccctaaac
cacgaagttaacccacgaaaggtttttgaactcatggggaatgttgtttcacaagtagct
tgtgatgctgagcagttctactgtgtgaagcggatttatgctggtggagaccagagcttt
gctcattgccactttcctcagaatggctctcccccagatgatctgcgaatgcgacattgt
aatcagcatgtcttaagcttgaatgatgacctcatacaaaaatggctgaggcacggtcat
ggaagactcgcaccagaaatgacagttgagattgatgatgtattctcctcagcaagttgt
ctaaatgggagctttctttctacaagtcatccagatcattatcatactagcagcaaatgt
cctggggtggacatgaacatggctcgcctcctcttccacagactcatccagcctgattat
ccacatatctcacaacaaatcacttccagtttggagaggcatttgattcccaacctctgc
agctctcctccagacatcgaggcactgaggctctacctcatacttccagagtgtcctctg
tttaaaaaccccaacacttacatcacactcaccattccctttgccaaggcagttatccac
ctcagcagtgctcccctcaaagtgcttggtaattggtggtcttgccttgatccagcagtg
tttcaaggactagtggaattgtataaagaggtgattgtgtatctgctccggatgcagaag
atgggaatttcaccatctgagcacaggacatttacctgcttcctcagtacctgtttgaaa
tttctggagattctgcacactgtaaatgagcgagctggccaaattattcagtatgacaag
ttttatatacatgaactggaagaccttgttgacatcaggagtgattatgttacatggatc
cagcatcagatgttctccatggccatggactctcaggtcaccctgtgcaaattcccattt
gtatttgatgctcaggcaaagaccacgctgcttcaaactgatgctgttatccagatgcag
atggctgtggatcaagcagaaagacagaacttcagctctttattcctgcctggtggcatg
gtggagtcagtaaatccgtgcctcattctcatggtgcgcagagaaaatgttgttgaggac
actatggaggttttgcggaagtccaaaaatgttgattacaagaaacctttaaaggtgatc
tttgttggagaggaggctgtggatgctggaggtgtgaggaaagaattcttcctcctcatc
atgaaagaacttctggaccccaaatatggcatgttcaggtattacaaggagtccagactc
atctggttttcggacaagacattagaggatatcgacttattccacctcattggggtcatt
tgtggtttggccatttataatatgactatagtggaactaaatttccctgtagctctgtac
aagaaactcttgaagaaaactccgactttggaggacctgaaggagctcatgcctgttgtt
ggcaggagtctgcaagaattattggactacatggaagatgatgttgaggatgcattctgc
ttgaacttcacaattactgtggaaaactttggtgaaactgaggtattggagctggtgcct
aatggaatgaacatcactgtaaacaatcacaacagacaagactttgtaaatgcctacgtt
gactacattttcaactcgtccgtggctcctcttttcaatgctttctatgctgggttccac
aaagtatgtggagggaaagttctggagctttttcagccaaatgaactacaggccatggtc
atagggaacactaattatgactggaaagaacttgagaagaacacaaagtacaagggagaa
tactggcctgaacaccccactatcaaattcttctgggacgttttccatgagttacctctg
gaaaagaagaagcagttcctgttgtttctcacaggtagtgatcgaatccccatcctgggc
atgaagagtcttgtcttggtcattcagccaacgggaggtggagagaactatcttcctgtt
gcccacacttgcttcaatcttttagatttgcctaagtacacaagccaagaaaacctcaaa
gaaaagcttctacaagccattgaacacaatcaaggcttcaatctggcatga
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