Ictalurus punctatus (channel catfish): 108263163
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Entry
108263163 CDS
T04658
Name
(RefSeq) integrin alpha-9 isoform X1
KO
K06585
integrin alpha 9
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04514
Cell adhesion molecules
ipu04810
Regulation of actin cytoskeleton
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108263163
04514 Cell adhesion molecules
108263163
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108263163
09142 Cell motility
04820 Cytoskeleton in muscle cells
108263163
04810 Regulation of actin cytoskeleton
108263163
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108263163
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin alpha subunits
108263163
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
108263163
NCBI-ProteinID:
XP_017319172
Ensembl:
ENSIPUG00000018145
UniProt:
A0A2D0QLA1
LinkDB
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Position
3:complement(8388618..8470137)
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AA seq
1032 aa
AA seq
DB search
MYCTRTGLLTWKSRMLDVLCVCLSLSLVCAYNIDLDHPLVFRGQNATFFGYSVLEHFHNN
TRWILVGAPRANSSFSNSVSSPGAVFKCRIHSNPEHRCTEIDLGRGNKKRESCGKTCQGD
RDDEWMGVSLARQDKPNGRVLACAHRWKNVYYESEHILPHGYCSLIQPTLQGRAQALIPC
YEDHKKMYGEEHGSCQAGIAGAFTEELVVMGAPGSYYWTGTVKVFNITSSTQYSLNKNQL
NSQRYSYLGYAVTAGHFSSPTAIDIAAGAPQDGGGGKVYVFRIDGVSLVKVFQESGKLMG
SYFGSSLCAVDLNADGLSDLLVGAPMFSEVRDEGQVSVFISRGNGVMEEAMVLNGDNAYN
AHFGECISAIGDIDDDGYQDVAIGAPKEDDFGGAVYIYHGDAKGIVNKYSMRLSGRSFNP
AIQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSKSVITVDVSIYLPASINITVPQ
CHEGPQHLNCFNVSVCMRFRGKHVPGRIELLYNLTADADKRYKGLSSRVYFTHGGEQSGT
VSQNFSLSINQQECHHYTAYVRKEVKDVFAAITFEASYSLGKHVLDVDRGRELASLSPVL
RWRKGDKIAQRNETWFEKNCLSDDCAADLKLHGKLLLSGHHIRPHLALGGVKNVSLNITI
VNAGDDAYDTNIYLNFSREVHYINFLQREEKGISCELIQLDFLKCSVGFPFMRAQTKYHL
SVLFDTSHLSGENETLLFLVHAKSANPEHENKLHDNTLELSILLMHEVDTAVTGVVTPSS
FVYGNSVDSSHFVKLEDLECNFQPLNFTFQVINNGPSRLPGSTVDIRIPNTLVANGADMF
HIIDTHVGEGRGNCTWHRNPTPCIIIQERENIFHTIFAFFTKSGRKVLDCDRPGRACLTI
SCSLGSQAKDEAALIDVQMLLNTETLKKDSSSVIQFVTRSHVQVDSRAMEVSSGLPEDIS
LVFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRHYREIIEAEKNRKD
SDESWDWVQKSE
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtactgcacgaggaccggactgttaacgtggaagagcagaatgttggatgttttgtgc
gtgtgtttgtccttgtctttggtttgtgcttacaacattgacctggatcaccccctggtt
ttccgtgggcagaacgcgacgttttttggctactcggttctggagcacttccacaataac
acacgatggattctggttggggctcctcgagcaaattcatccttcagtaactctgtttcc
tctcctggagctgtgtttaagtgccgtatacacagcaacccagagcatcgctgtacagag
atcgacttgggcagaggtaacaagaaaagggagtcttgtggaaagacatgccaaggggac
agggatgatgagtggatgggggtcagtctggcaagacaagacaaacccaatggaagagtt
ctggcctgtgcacatcgctggaaaaatgtgtactatgaatcagagcacatcctaccacat
ggctactgctctctaatccaaccaacattacaaggcagggcccaggcactcattccatgt
tatgaagatcataagaagatgtatggggaagaacatggctcatgccaggcagggatcgca
ggagctttcacggaggagctggtggtcatgggagcaccgggatcatactactggactgga
acagtgaaagtgttcaatatcacctccagtacacaatacagcctcaacaaaaatcagctg
aattctcaaagatacagttacctgggctatgcagtgacagctggtcacttctcctcacct
actgccatcgatatcgctgccggtgcacctcaggatggtggtggaggaaaagtttacgtc
ttcagaattgacggtgtctcgcttgtgaaggtctttcaagaatcagggaaactgatgggc
tcttactttggctcctcactgtgtgcagttgacctgaacgcagatggactctcagacctg
ctggtcggagcaccaatgttcagtgaagttcgggatgaaggccaggtgtctgttttcatc
agcaggggcaatggggtgatggaggaggcgatggttttgaatggggacaacgcatacaat
gctcatttcggagagtgtatcagtgccattggggacatcgatgatgacgggtaccaagat
gtggcgataggagcacccaaagaggatgactttgggggtgcagtgtacatctaccatggt
gatgctaaaggaatagtcaacaagtactcaatgaggttgtctgggcgaagttttaatcca
gccatccaaatgtttggccagtcaatatctggcaatgtggacatggacggaaacggatat
ccagatgtgacaatcggtgcattcatggcagacagtgtggtgttattaaggtcgaaatca
gtaatcacagtggacgtgtccatctatttgccagcctccataaacattactgtgcctcag
tgtcatgaaggtccacagcatctcaactgctttaacgtcagcgtctgtatgcgcttccgt
gggaaacatgtgccaggacggatagagctgctgtacaatctaacagcggatgcagataag
cgatataaaggcctgtcttcacgggtctatttcactcatggtggcgagcagagtggtact
gtgagtcaaaacttcagccttagcatcaaccagcaggagtgccatcactacacggcctat
gtacggaaagaagtgaaggatgtgtttgcagccatcacatttgaggcatcgtacagcctg
ggcaagcatgtactggatgtagaccgtgggcgtgagcttgcttcactctctcctgtacta
cgctggaggaaaggagacaagattgcacaaaggaatgagacttggtttgagaagaactgt
ttgtctgatgactgtgctgctgacctgaagctacatggcaaactgttgctttcaggacat
cacatcaggcctcatcttgctctcggaggggtgaaaaatgtctctctcaatataaccatt
gtcaatgctggagatgacgcttacgacaccaacatctacctaaatttttccagggaggtt
cactacataaactttctgcagagggaagagaagggcatttcctgtgaactgattcagctg
gacttcctcaaatgcagtgtgggatttcctttcatgagagcccagactaagtaccatctg
tctgtgctttttgacacaagtcatctgtctggtgaaaatgaaacattgctatttttagta
catgccaagagcgccaacccagaacatgagaacaaattacacgataacacgttggagctg
tccatcctgctgatgcacgaagtggatacagctgtcactggtgtggttactccttcctca
ttcgtgtatggaaattctgttgactcttctcactttgttaaactggaggacttggagtgc
aacttccagcctctcaactttaccttccaggtgataaataatgggccaagcagactgcca
ggctcaactgtggacataaggatacctaacacactggtggcaaatggagccgacatgttc
cacatcatagacacacatgtaggtgagggcagagggaactgtacatggcacagaaaccct
acaccatgcatcatcatccaggagagagagaatattttccataccatctttgcattcttc
accaagtctggcaggaaggtcttggactgtgaccggccaggaagagcctgtctaaccatt
tcctgtagcttaggatcccaagctaaagacgaagctgcacttattgatgtgcaaatgcta
ctgaacactgaaacacttaagaaagacagctcctcggttattcagtttgtgacacgaagt
catgtccaagtggacagccgggctatggaggtgtccagcggcctaccagaggacatttct
ctggtgtttgaggctctgcacagtcaggagcccaggggttatgtggtgggatggatcatt
gccatcagtctgctagtggggatcctcatcttcctcctgctggctgtgcttctctggaag
atgggatttttcaggcggcattaccgagagataatagaggcagaaaagaacaggaaagac
agcgatgagagctgggattgggttcagaagagtgaatga
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integrated database retrieval system