Ictalurus punctatus (channel catfish): 108263274
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Entry
108263274 CDS
T04658
Name
(RefSeq) tetratricopeptide repeat protein 7A
KO
K21843
tetratricopeptide repeat protein 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108263274
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
108263274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_14
TPR_2
TPR_19
TPR_8
TPR_16
ANAPC3
TPR_11
TPR_9
TPR_1
TPR_12
TPR_20
HrpB1_HrpK
ChAPs
Motif
Other DBs
NCBI-GeneID:
108263274
NCBI-ProteinID:
XP_017319411
Ensembl:
ENSIPUG00000010011
UniProt:
A0A2D0QNV2
LinkDB
All DBs
Position
3:complement(12784668..12827924)
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AA seq
849 aa
AA seq
DB search
MSARLSLSLSRLEAEIDRCRAECQWDRIPTLVDQLAAARFHEEDDYGLLLQAEALLEDCL
LENVALLRNSTPLSEHTQPKLAQAKGHLNSLLSRGRLEPHYLNEALLLLAKVHYTQGHYR
DAQGMCARAGIEEFTQDEQPLYRLRLLAEAFVIKGLSLDHQTVSAASRVRLSEREEECLS
CYLRACDTALLFLQELDKAVCTMSNKTAKSSVSASPVEVDPGYFLQAALQSAYLCLLHKG
HLVQGTNQLRQVLRVVESRGSQNVRKTVARRLAEVLLSSVSEESYWGPLSPSPPTWLHKD
GATHPKDAIYPSSRPPQYYSTEGAFCPQDVVEEAVLLLLITESMASGEAVISRTPEHKEA
REASIQDASSVYDLLSIGMARRGQFAMLSECLERAMKFSFSEFHLWYQLGLSLMASGKNE
GAVSVLKECARMKPQDPTPPLLAAKVCINQLHWLDEAEALAKGVVALGEGAEESLARAHL
TIGLCYSLQASDVMLKGERDEFNKRALHALQTAHAIDPQDPQIALYLALQLALVRQVSAA
MEPLQLALNLRNDDLHSLHLLVLLLSAQKHYQHALDTLNLTLSQYHDNFNLLFTKVKLEE
ALFGPAVALQTCKEMLHLWQNRYDFARLSETDDSSSIPPPEPGPLSRKPSGLHLTLPDFQ
ETETGSQSAPSLAVSRLEQAMSEVSAISSTQRHGPAHIWTILERIWLQAGELFMADGRLK
EAQFCVQEAGSLFPTSHSVLLLRGRLAERRGNDTEAKSLYDEALAINPTGHHILIHLGKL
LVRMGRVGLGEKVLREAVQTHSLAHEAWSGLGEALQSHGSAQAPDCFLTALELESSCPIR
PFTIIPREL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcggctctccctgtctctgagccgcctggaagcggagatcgatcgctgccgg
gccgagtgccaatgggacaggatcccgactctggtggatcaacttgcagccgctcgcttc
catgaggaagatgactacgggttgctgctccaggctgaggctctgctggaagattgcctg
cttgagaacgtggctcttcttcggaactccacccctctgtccgaacacactcaacccaaa
ttagcccaagccaaagggcatttgaacagcctactaagcagaggacgcctggagccacac
tacctgaatgaagctttactcctactggccaaggtgcactatacacagggtcactatcga
gatgcccaaggcatgtgcgcccgagctggcattgaggaattcacccaggatgagcagccc
ctttaccgtctgcgcctgctggccgaggcttttgttatcaaaggtctgtctctggaccat
caaacagtgtctgcagcctcgcgtgttcgtctctctgagagagaagaagaatgcttgtcc
tgttatctccgggcctgtgatactgctctgctcttcctacaagagttagacaaggctgtt
tgcacaatgagtaacaagacagccaaaagcagcgtatcagctagtccagtagaggtggac
ccaggttacttcctgcaggctgctctccagagtgcatatctctgcctgctacacaaaggt
catttggttcaggggactaatcagttgcgtcaggtcttgagggtggtggagagccgcggg
tctcagaatgttcgaaagacggtagcaaggaggcttgcagaggtgttgttgagttcagtt
agtgaggaaagctactgggggccactgtcaccttcaccccccacctggctgcacaaggat
ggagccacacacccgaaagatgccatctacccttcttctagaccaccacagtactacagc
acagagggagcgttctgtccacaggacgtggtggaagaggctgtgctcctgctgctcatc
accgagtcaatggccagcggtgaggcagtgatcagccgcacgccagagcacaaggaggca
cgtgaggccagcatccaggatgcttcctctgtgtatgacctgctcagcatcggcatggcc
aggagagggcaatttgccatgctgtctgagtgtttggagcgggctatgaagttctccttt
agtgagtttcatctctggtaccagctgggcttgtctctcatggctagtgggaagaatgaa
ggtgcggtgtctgtgcttaaagaatgcgccaggatgaaacctcaggaccccacaccacca
ctgctggcagccaaagtgtgcattaaccagctgcactggctagatgaagctgaggctctt
gcaaaaggtgtggttgctttgggtgaaggagctgaggagtctcttgccagagcacacctg
accataggactgtgttatagtctgcaagcttcagatgtgatgctgaaaggtgaacgagat
gagttcaacaaaagagctctacatgcacttcagactgctcatgcaatagacccccaggac
cctcagattgccctctacctcgctcttcagctggccttagtgcgacaggtgtcggcagca
atggagcctctgcagttggcactgaatctacgcaatgatgacctgcactccttacatcta
ctggtgcttcttcttagtgctcagaaacactaccagcatgccctcgacacactcaacctc
accctcagccagtaccacgacaacttcaacctgttgtttactaaagtgaaattagaggag
gctttatttggtccagctgtagctctgcagacatgcaaggaaatgctacacttgtggcag
aatcgctacgattttgcccggctaagtgagactgatgacagcagcagtattcctcctcct
gagccaggcccattaagcagaaagcccagcggcctacatctcacactaccagattttcag
gagacagaaaccggctctcagagtgctccatccctggctgtgtctcggctggagcaggcc
atgtcggaagtgtctgcaatcagctctacccagagacatggccccgcccacatttggacc
attctggagcgcatctggctgcaggcaggggagctgttcatggctgatggacggctgaag
gaggctcagttctgtgtgcaggaggcaggatcattgttccccacctcacactcggtgctg
ttgctgaggggccgactcgctgaacgcagaggcaatgatactgaggccaagagcctgtat
gatgaagccctggctatcaaccccacaggacaccacatactaatccatctagggaagttg
ttggtgcgtatgggccgggtgggtttaggagagaaggtgttacgggaagccgtgcagacc
cacagtctggcccatgaagcatggagtggcctaggggaggcgctgcagagccacggcagc
gctcaggccccagactgcttcctcacggccctggagctggagtccagctgtcccatcagg
cctttcaccatcatcccccgagagctgtga
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