Ictalurus punctatus (channel catfish): 108263327
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Entry
108263327 CDS
T04658
Symbol
parga
Name
(RefSeq) poly(ADP-ribose) glycohydrolase
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108263327 (parga)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
108263327 (parga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
108263327
NCBI-ProteinID:
XP_017319498
Ensembl:
ENSIPUG00000024555
UniProt:
A0A2D0QLW3
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All DBs
Position
3:complement(20226263..20262565)
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AA seq
786 aa
AA seq
DB search
MSALQNEKRLRLEADCHSESFTGTHRGSLSTNVLTPNMDETRMEVNSNITGDVKVENSRS
DPHASFECNKTDACQLKENDKRFDVSQRQNAPGDQKSQETPGSSNTEAMYGPSSPNSIVH
DNAVIEMKPKVEETALVSNSTDANLSGVASVCMEKAKLDLSLSQNTSADVEMLSPESPTC
KSLVYNSSGERQNPCTEAPQAPCAKSSSSEESTKVIDPRAGPGTVCGPDVTAMETENPDI
PVSGGNSSVANEDSSGSQSQSRKWLGTPIEELRRMPMCAQALPPLRATENHKVLIRTDLL
KEGEVPVPYPNKFRDAWDDMTVKMPCSEKNLFPMENEDGVQSRWELIISALETECKSSLD
IREAILTYNTAHAKRWDFTALNFLCTDGLEHTEAQYLFNVILPKMVTLALSAPKVCTQPI
PLLKQNMNQSLTLSQEQIACLLANAFFCTFPRRNSRKSEYYNYPEINFYRLFEGSARQKI
EKLRTLLCYFRRVTTEKPTGLVTFTRQSLNSFPKWESLSTQLTRLHISCEGTIEDQGYGM
LQVDFANRMVGGGVTGLGLVQEEIRFLINPELIVSRLFTEALEHNECLIITGTEQYSKYS
GYAESYKWKANHKDETPRDEWQRRCTEIVAVDALKYRHYMEQFHPEKFTRELNKAYCGFV
RQGVNTQNLSAIATGNWGCGAFGGDTRLKALLQLMAAAEAGRDVAYFTFGELALMRDVHE
LHTFLTDKQVSVGKLYGLLKQYFNLVVKTSHSQRPDVILYGFIYEQISSDPPPEPTAASP
LPPDGH
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctttacagaatgagaaaaggctgagactggaagctgactgtcactcagagagt
ttcactggaacacaccgaggtagtttgtccaccaatgtactaacaccaaatatggatgaa
accaggatggaagtaaacagcaatatcactggtgatgtgaaggtcgaaaactcgagaagt
gatcctcatgcatcatttgagtgcaacaagacagatgcttgtcagttgaaagaaaatgac
aagcgttttgatgtatcccaaaggcaaaatgctccaggtgaccaaaaatcacaggaaact
ccaggaagctccaacacagaggcgatgtatggaccgagttctccaaatagcattgtccat
gataatgccgtcatcgagatgaagcccaaggttgaagagactgctcttgtgtctaactcg
acagatgctaatcttagcggggtagcaagtgtttgtatggaaaaggcaaagctggatctc
agtttatctcagaacacaagtgctgatgtagagatgctgagcccagagagcccaacctgc
aaatccttggtatataacagctcaggggaaaggcagaatccttgcacagaggcacctcag
gcaccttgtgctaaatcttcatcttctgaggagtccactaaggtcattgaccctagagct
ggacctggaactgtctgtggtcctgacgtgacagccatggagacggaaaatcctgacatt
cccgtctctggtggaaattcgtctgtggcaaatgaagactccagcggcagccagtcacaa
tcaaggaagtggttgggaactcctatagaggagctgaggaggatgccaatgtgtgctcag
gccctacccccactcagggcaacagaaaatcacaaagtgctcatcaggactgacctgctc
aaagaaggcgaggtccctgttccataccccaacaagttccgagatgcctgggatgatatg
actgtaaagatgccctgctcagaaaagaacctttttcctatggagaatgaggatggagtg
cagagtcggtgggagctcattatttcagccttggaaaccgaatgcaaaagttcactggat
attcgggaagcaatattgacgtacaacacagcacacgcaaagagatgggacttcacagct
ctgaattttctctgcactgatggcctggaacacaccgaggcacagtatctgtttaatgtt
atattgccaaagatggtaacattagccctgagtgctcccaaagtttgtacccagccaatc
cccctgcttaagcagaacatgaatcagtccctgactctgtcccaggaacaaattgcctgc
ttgctggccaacgccttcttctgtacgttccccaggcgcaactcacgcaagtctgagtac
tacaactaccctgagattaatttctacagattgtttgagggatccgctcgtcaaaagatc
gaaaaactcagaactcttctttgctatttcagaagagtcaccactgaaaagcccactggt
ctcgtgacatttacaagacaaagcctgaacagttttcctaaatgggaaagcttgtcgacc
cagctcacacgacttcatatctcctgcgagggcaccattgaggatcagggatacggcatg
ctgcaggtcgactttgctaacaggatggtaggaggaggggtaacaggactagggttggtc
caggaggagattcgctttctcatcaacccagagcttattgtctcgcgtctctttactgag
gcgttggaacacaatgagtgccttatcatcacaggcactgagcagtacagtaagtactct
ggttatgcagagagctacaaatggaaggccaaccacaaagatgagacaccaagggatgag
tggcagagaaggtgtacagagattgtggcagtggatgcactgaagtacagacactacatg
gagcaattccaccctgagaaattcacaagggaactcaacaaggcgtactgtggatttgtg
cggcaaggtgtcaacacccagaacctctcagccattgccacaggaaactggggatgtggt
gcattcgggggagacacacgactcaaagccttgctgcagctaatggcggcagcagaggct
ggcagagatgtggcctatttcacattcggtgaattggctctcatgagggatgtccatgaa
ctgcacacgtttctgacagataagcaggtctcagtgggcaaactgtatggcctcctgaag
cagtattttaatctggtggtgaagaccagtcacagtcagaggcctgatgtcattctgtat
ggcttcatctatgagcagatcagctcagatcctcctcctgagcccactgcagcctcccct
cttcctccagatggacattaa
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