Ictalurus punctatus (channel catfish): 108263403
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Entry
108263403 CDS
T04658
Name
(RefSeq) runt-related transcription factor 3 isoform X1
KO
K09279
runt-related transcription factor 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108263403
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
108263403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
108263403
NCBI-ProteinID:
XP_017319631
Ensembl:
ENSIPUG00000019842
UniProt:
A0A2D0QPI1
LinkDB
All DBs
Position
3:3076279..3131961
Genome browser
AA seq
446 aa
AA seq
DB search
MASNSIFDSFSNYSTLLRDPTTTRRFTPPSTSFSCGKLGVGSDGGAGGASSMSAAGPLRS
RHAADTRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTL
VTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTGPPQVATY
HRAIKVTVDGPREPRRHRVKPEDSQKIQFNERLSEMERYHQRASLRVGPGNGTVRPSHQS
HYGPTTTTQIPGLWPEQMDTPQIKPCKVEDDLRWPSTDLFQQRTTFPSLSPLTTTRFSDS
HMHYPGPFTYSTNPSSAGIGGLSMTGVPTSTRYTTYLPPPYPGNQNQSSHFQTNSSPYHL
YYGTGSGSYQFSMVPAGGTAGSTVGERSPTRMLTSCPAAGAASGSGGGAGGLIGGSDGVE
ADGSHSNSPSAMSTPGRMDESVWRPY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagcatctttgactctttctctaactactccactttactcagagacccg
accaccaccagaaggttcacgccgccctccacgtctttctcgtgcgggaagctcggcgtc
ggcagtgacggcggcgcgggcggtgcgagcagcatgagcgcggctggtcctctgaggtcg
cggcatgcggcggacacgcgctccgtggtggacgtgctggcggaccacgccggagagctc
gtgcgcaccgacagtcccaactttctgtgctcggttctgccttcacactggcgctgcaac
aaaactcttcccgtggccttcaaggtggtggctcttggtgatgtccccgacggcaccctg
gttaccgtcatggccggaaacgacgagaattattcggctgagttgaggaacgcgtccgcc
gtcatgaagaaccaagtggcccgtttcaacgacctgagatttgtcggaagaagcggcaga
ggaaaaagttttactctgacaatcactgtgttcactggaccaccccaagtggccacatac
caccgcgccatcaaagtcacagtggacggcccacgagagcctagacgtcaccgagtgaag
cctgaggactctcagaagatccagttcaacgaacggctgagtgagatggagaggtatcat
cagcgtgccagcttgagagtgggccccggcaacggcaccgtccggccctcacaccagagc
cattacggccctactactaccacccagataccaggactgtggcctgagcagatggacact
cctcaaatcaaaccctgcaaagtggaggacgacctccgctggccaagtacggatctgttt
cagcagcgcaccacgttcccatccctgtctcctctcacaacgacgcggttctccgactct
cacatgcattaccccgggcccttcacctactccaccaacccatccagtgcaggcatcggg
ggtctcagcatgacaggtgttcctacctccacgcgctacacaacctacctgcccccacca
taccccggaaaccagaaccagagctcgcacttccagaccaactcgtccccctaccacctg
tactacggcaccggctcaggctcctaccagttctccatggttcctgcaggcggcactgcc
gggagcacggtcggagagcgttcgcccacccgcatgctgacctcctgcccggcggcaggc
gcagcttcggggtcaggaggcggagccggcggcctgatcggcggcagcgacggcgtggag
gccgacggcagccacagcaactctccgagtgccatgagcacacccggacgaatggacgag
tccgtctggaggccttactga
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