Ictalurus punctatus (channel catfish): 108263411
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Entry
108263411 CDS
T04658
Name
(RefSeq) UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1
KO
K09654
beta-1,3-N-acetylgalactosaminyltransferase 2 [EC:
2.4.1.313
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00515
Mannose type O-glycan biosynthesis
ipu01100
Metabolic pathways
Module
ipu_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
108263411
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108263411
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.313 protein O-mannose beta-1,3-N-acetylgalactosaminyltransferase
108263411
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
Wide specificity
108263411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
GAPES3
Motif
Other DBs
NCBI-GeneID:
108263411
NCBI-ProteinID:
XP_017319645
Ensembl:
ENSIPUG00000013696
UniProt:
W5UJC1
A0A2D0QQA6
LinkDB
All DBs
Position
3:9729690..9788885
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AA seq
488 aa
AA seq
DB search
MRRLALFLLPCVIAVLVHEWWWLKDQTDFFSNVRAVGSRRPVYEVVVGVLSARHHHDLRE
AIRGTWMGYVKDHPDFQNRVLVKFIIGKHGCAIPEEDREDPYSCTQLNLTDPVAMQDVTI
LSKPDALVPSDVSAICLDFKVLHPVVITQLGVFPSGPQKDFRGSVTVKLFPVDQKEPIVT
THLTALSPGVYAEGIWYKTVEQFVLPKGFEGNLLWESQDPAHLMTINVSKVQLNTGGGVI
KLGPIEEGILPHRNARGFPGLAGGFIFSVYDVEGLKAQLRGRADRQQAHETRLTKEEKAL
QEESHTYGDIIFVDVVDTYRTVPYKLLYFYKWAVRNADFSLLLKTDDDCYINVDEVLMNI
DYKSLMRSNLWWGNFRQSWAVDRVGKWQELEYTSPVYPAFACGSGYVVSRDLVEWLASNA
EKLKVYQGEDVSMGIWMAAVGPQKYQDAGWLCEKECYVDMLSSPQHTVKELRYLWDQKRV
CGDPCGCS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagaagattagcactgtttctactcccctgtgtgatcgcggtgctggtgcatgagtgg
tggtggctgaaagaccaaactgatttcttctcgaatgtcagggctgtaggcagcaggagg
ccggtgtatgaagttgtggttggagttttatctgccaggcaccaccatgatctgagggag
gccataagaggcacatggatggggtacgtcaaagaccaccctgacttccagaatcgggtg
ctggtgaaatttatcatcggtaaacatggttgtgcaatacctgaagaagatcgagaagac
ccatattcctgtacccaacttaacctcacagatccagtggccatgcaggatgtgaccatc
ctaagcaagcctgatgctttggtgccatctgatgtctcagccatatgtttggattttaag
gtgctccaccctgtagtgatcacgcaactgggtgtgtttcccagtggcccacagaaggat
ttcaggggaagtgtcacagtaaagttatttccagtggaccaaaaggagcctattgtgact
actcatcttactgccctgagtccaggtgtctatgcagagggaatctggtataaaactgtg
gagcagttcgttttgcccaagggtttcgagggtaatttgttatgggagagccaggatccg
gcacacttgatgactatcaatgtgtccaaagttcagctcaacactggtggaggagtgatc
aagttaggaccaatagaagagggcatcctgcctcacagaaacgcacgtggttttcctgga
ctagccggaggattcattttctctgtttatgatgtggagggattgaaggcacagctgcgt
ggccgtgcagacagacagcaggctcacgagaccaggctgacaaaggaagaaaaagccctg
caggaggagagtcacacatatggggatattatttttgttgacgttgtggacacgtacagg
accgtgccttataaactgctgtacttttacaaatgggcggtgaggaatgctgacttcagt
ctgctcctgaagactgatgatgattgctatatcaacgtggatgaagtgttaatgaacatt
gactacaagagcctgatgcgcagcaatctgtggtggggaaattttcgccagagctgggct
gtggatcgtgtagggaagtggcaggaattggagtacactagtcctgtgtatccagccttt
gcctgtggctctgggtatgtggtttccagagacttagtggagtggctggccagcaatgca
gagaagctcaaagtttaccagggagaggatgtgagcatgggaatatggatggctgcagta
gggcctcaaaaatatcaggatgcaggctggctgtgtgagaaagagtgctatgtggacatg
ttgtcatcaccacaacatacagtgaaggaactacgctatctctgggatcagaaaagagtt
tgtggggatccatgtggctgttcttag
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