Ictalurus punctatus (channel catfish): 108263432
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Entry
108263432 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108263432
04082 Neuroactive ligand signaling
108263432
04519 Cadherin signaling
108263432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108263432
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108263432
SSDB
Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108263432
NCBI-ProteinID:
XP_017319688
Ensembl:
ENSIPUG00000007902
UniProt:
A0A2D0QMF8
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All DBs
Position
3:14408145..14426651
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AA seq
480 aa
AA seq
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MWRAGERWRPALLCLPVLMAVTLGRTPISHRINEPSNMSYVKVTVDKLLKGYDIRLRPDF
GGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQL
WVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCT
LEIESYGYTTDDIEFYWQEGSSVTGVDNIELPQFSIIDYKTLSKKVVFATGSYPRLSLSF
KLKRNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKTNNEKSRLE
SNKIQVDVHGNIPLTNLDLRLTGAEMLSGLGDPRNTMFSYDSASIQYRKPLTGCDLYGRP
TASLEQPIKHKKSRLRKRASQLKVKIPDLTDVNSIDKWSRVIFPITYTFFNLVYWLYYVH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggctggagagcgctggcgcccggcgctgctgtgtctgcccgtgctgatggcc
gtgacactcggccgcactccgatctcgcacaggattaacgagcccagcaacatgtcgtac
gtcaaagtcaccgtggacaaactgctgaaaggctacgacattcggctcaggcccgatttc
ggaggtcctccggttgacgtcgggatgagtattgacatctccagcatcgacatggtgtct
gaggtgaacatggattacaccatcaccatgtatttccagcaatcatggcgtgataaacgc
ctgtcctacacggggattcctctgaacttgacactggataaccgtgtggctgatcaactc
tgggtgcctgacacttactttataaatgacaagaaatctttcgttcatggtgtcaccgtc
aagaaccgcatgattcggctgcatccagatggaactgtgctctatggactcaggataact
acaacagcagcctgtatgatggacctgcggaggtaccccctggatgaacagaactgcacc
ttggagattgagagctatgggtataccacagatgacattgagttttattggcaggaggga
agttcagtgactggagtagacaacattgagttgccacagttctccatcattgactataaa
actttgtctaagaaggtggtctttgcaacagggtcataccctcgtctgtccctgagcttt
aagctgaagagaaacattggatattttatcctgcaaacttacatgccctcaaacctgatc
accatcctgtcctgggtctccttctggattaactatgatgcttctgcagcacgggtagct
ctaggaatcactactgtactgaccatgaccaccatcaacacccatctgcgagagacgcta
cccaagatcccctatgtaaaagccatagatatatacctaatgggctgctttgtcttcgta
ttcttggccctgcttgagtatgcgtttgttaactacattttcttcggccgaggtccacac
ctacagaagaaagtggcagaaaaagctgctaagaccaacaatgagaagagcagactggag
agcaacaaaatccaggtggatgtccatggaaacattccccttaccaatcttgacctccgc
ctcactggggcagagatgctcagtggtcttggtgaccctcggaataccatgttctcttat
gacagtgccagcatccaataccgcaagcccctgacaggctgtgacctttacggccggcca
actgcttcccttgaacagccaatcaagcacaagaagagtcgcttgaggaagcgggcctct
cagcttaaggtgaaaattccagacctgacagatgtgaattccatcgacaagtggtcacgt
gtcatctttcccatcacctacactttcttcaacctagtctattggctttactatgtccac
tag
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