Ictalurus punctatus (channel catfish): 108263434
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Entry
108263434 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X2
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108263434
04082 Neuroactive ligand signaling
108263434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108263434
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108263434
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108263434
NCBI-ProteinID:
XP_017319693
UniProt:
A0A2D0QMG3
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Position
3:14362441..14373702
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AA seq
458 aa
AA seq
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MAVLHPRRRRDALVWLLPGLLGVCMAFGPSKAEEDDYEDVPINKTWVLSPKVYDSDVTLI
LNKLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFN
SSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAE
CYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRWQRRAVEVADQRYWRLYQFAFVGLRNTS
DVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGI
TTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQNKKTK
SSSAPKSSMANIRPGTSLLQMNNIAPYHDDDDDYAYECLDGKDCTSFFCCFDDCRSGAWR
ENRMHVHVSKIDSYSRIFFPTAFGLFNLVYWIGYLYLI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgcatccccgcaggaggagagacgcactggtctggctgttgcctggactg
ctcggagtatgcatggcattcggacccagtaaagctgaggaggacgattatgaggatgtt
cccataaataaaacttgggttttatccccaaaggtttatgacagtgatgtcaccctcatc
ttgaataaattactgcagggctatgacaacaaactgcgaccagacattggagtaagaccc
actgtcatcgagacagccgtgtatgtgaacagcataggcccagtggatcccatcaacatg
gagtacaccatagacatcttctttgctcagacatggtatgacagccggctcaagtttaac
agcagcatgaagctcctcatgctaaacagcaacatggtgggaaagatctggatccctgat
acgtttttccgcaactcccgcaaatctgatgcccactggatcactacacccaaccgactt
ctgcgcctttggagcaatggacgtgtaatgtacactctgaggttgactattaatgcggaa
tgctaccttaagctgcataactttcctatggatgaacattcgtgtccgctggagttttca
agctatgggtatccaaaaaatgagatccagtatagatggcagcgtcgcgctgttgaggta
gctgaccagaggtactggagactttaccagtttgcctttgttggcctgcgcaacacatct
gatgtggcacatactcagtctggggagtatgtgattatgactatcttctttgatctgagc
cggagaatgggctacttcaccatccagacctacatcccatgcagcatgattgtagtgctg
tcctgggtttccttctggatcaacaaagacgctgtgcctgcccgaacgtctttaggtatc
acaactgtccttactatgacaaccctaagcaccatatccaggaagtcattgccgaaagtg
tcttatgtgacagccatggatttgtttgtgtctgtttgcttcatcttcacctttgctgca
cttatggagtatggaacactgcactacttcaccagtaaccgtcagaacaaaaaaaccaag
tcgagcagtgcaccgaaatcaagcatggcgaacatcagaccagggacgtctctgctccag
atgaacaacattgcgccttatcatgatgatgatgatgattacgcatacgagtgtctggat
gggaaagactgcacaagttttttctgctgctttgatgactgtcgctcaggggcatggcgt
gaaaacaggatgcatgttcatgtgtccaaaattgactcctactccagaatattcttccca
actgcttttggcctcttcaaccttgtgtactggattgggtacctctatctcatataa
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