Ictalurus punctatus (channel catfish): 108263450
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Entry
108263450 CDS
T04658
Symbol
pax2a
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108263450 (pax2a)
04131 Membrane trafficking [BR:
ipu04131
]
108263450 (pax2a)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108263450 (pax2a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108263450 (pax2a)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108263450 (pax2a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108263450 (pax2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108263450
NCBI-ProteinID:
XP_017319723
Ensembl:
ENSIPUG00000024635
UniProt:
A0A2D0QMJ7
LinkDB
All DBs
Position
3:complement(19975392..20004311)
Genome browser
AA seq
491 aa
AA seq
DB search
MDIHCKADPFTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAE
GVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGTGTTLTTAGHTIVPSTASPPVSSASNDP
VGSYSINGILGIPRSNGEKRKRDDVLWSGNHLDGRKIGYYGSDGSGPNSDSQGSVESLRK
HLRADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPALNPGLDEVKPSLST
SASSELGSSVSQSYPVVAESHSSMVCVKQEPHEASLAPFTPSSLAASGLAELLPFQPGVS
VDASTPCYGAYGHHGPSYGQYASQPIIAGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGM
VPGSDFSGNPYSHPQYTTYNEAWRFSNPALLMPHPGARPLPLLPLPMTATSYHGNHVTLQ
QHNHDPRIAPV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagacccatttacggcgatgcaccggcatgggggtgtgaac
cagctaggaggggtgtttgtgaacggtagacccctacctgacgtggttcggcagaggatc
gtggagctggcacaccaaggggtcaggccgtgtgacatctccagacagctccgggtcagc
catggctgtgtcagcaaaattctgggcagatactacgaaaccggcagtattaaacctgga
gttattggaggttccaaaccaaaagtggccactccaaaagttgtggataaaattgcagaa
tataagcggcagaaccccaccatgttcgcctgggagatcagagaccgacttctcgccgaa
ggcgtgtgtgacaacgacacggttccaagcgtatcctccatcaacaggataatacggacc
aaagttcagcagcccttccatccatctccagacgggacaggaactaccctcaccacagct
ggacacactatagtgcctagcacagcctccccacctgtatcaagtgcttcgaatgacccg
gtgggctcctactctatcaacggcatcctcggaatccctcggtccaatggcgaaaagaga
aaacgtgatgatgttctctggagtggcaaccacttggatgggaggaaaataggatattat
ggctcagatggctctggcccaaacagtgattctcagggtagtgtggagagtttacgaaag
cacctgagggctgatgctttcactcagcagcagctggaggctctggaccgggtgtttgag
cggccatcataccctgacgtcttcccaacatcagagcacatcaaaccagagcaggctaac
gaatactcactaccagcactgaacccaggactggacgaggtcaagcccagcctatccacc
agcgccagctccgaattgggctccagcgtttcccagagctacccagtagtggcagaatcc
cattcctccatggtgtgtgttaagcaagagccacacgaggcttcgctggctcctttcacc
ccctcttcacttgcagcctcggggctagcggaactgttgcccttccagcctggtgtgtca
gtagacgcctccaccccctgctacggtgcctatggccaccatggccccagctacggccag
tacgcaagccagcctattatagcaggtcgagacatggccagcacgactctcccaggttac
ccccctcacgtcccccccactgggcaaggcagctaccccacctcaacacttgctggaatg
gttcctggaagcgatttttcaggaaacccctactcccatccacaatacacaacctacaat
gaagcttggaggttcagcaaccctgcactattaatgccgcatcccggggctcggcccctc
ccactgctgccactgcctatgaccgccactagttaccatggcaaccacgtcactctgcag
caacacaaccatgatccacgcatcgcaccagtgtga
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