Ictalurus punctatus (channel catfish): 108263456 Help Entry 108263456         CDS       T04658                                  Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     108263456  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ipu03400]     108263456 DNA repair and recombination proteins [BR:ipu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      108263456 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  108263456 NCBI-ProteinID:  XP_017319742 Ensembl:  ENSIPUG00000018740 UniProt:  A0A2D0QMY1 LinkDB All DBs Position 3:8590704..8603669 Genome browser AA seq 1416 aa AA seqDB search MYVHETRLPPRPLPLCTFPRTVICTACVEEKQLRVSYINFVQLVMAKQSSIFNFFTKSPP AVAKTKPNPSPTEADVPSLVSKSNSSPKEEAKQAAQNSKKAAAKPLKTLAKVGHAKPFGQ RATDTNESSSFPFHAGDLVWAKLEGHPWWPCMMVPQPVSGQQMKGRGQDQRVHVHFFDEP ATRGWVRKKYVRQYKGSDSTDAKTGGLFFSGKPVIRRAMELADRVLQDSPEQRLKMPVCM DASDEEAEDEEMEVEQSTPSDEEISEEEVQKVKPSRRSSRAAAEHAQKPKRRRIVVASDS EGSGEEFKPDQADQAETSSEEEDGVISDVEESIPESEPDSPVKPVKRKRASEKTAKTKST AIPSEIHKSNSVSLAADTKSRLSAFSAPDSFESQGSASGKLDGAGVWDHEKLDWLQNGKR KDARRRRQSDMDYDPTTLYVPEDFLNKVTPGMRRWWQLKSEMFDTVLFYKVGKFYELYHM DAVIGVSELGLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPEMMEARCKA MVRPTKFDRVVRREVCRVITRGTQTYSVLDGAPSVAESKYLLSVKEKNQEENAGQYHIYG VCFVDSSMGRFYVGQFQDDRLCSRLRTLLAHYVPAQVLFEKGNLSAETQKIFKAALSSAM HESLSAGSQFWDAQKTLKTLADEDYFKEIKGESSNSSGSVLPSALKAMTSESDSLGLTPK EGYELALSALGGCIFYLKKCLVDQELLSMANFQEYVPVDVEIQQSENASNFFAQTCQRMV LDGVTLANLEILQNGSTGGTEGTLLEQLDTCCTPFGKRLLKQWLCGPLCNPASINDRLDA LEDLMAAPAQATEVTELLKKLPDLERLLLKIHSMGTPLKGQDHPDSRAVFYEEIVYSKRK IADFLSALEGFKTMQEIVSIMESVSVGFQSKLLRQVVILKTRSDEGMFPNLRPELNRWDT AFDHQKARTTGVITPKAGFDPEYDQALSGIKDCERNLQDYLDRQKKRLGCKNLSYWGTGR NRYQMEVPDSVSERSLPEEFEVRSTKKGWKRYSTKQLEHMFSELQSWEDKRDTALKDCMR RLFYNFDKNYKDWRTAVECMSVLDVLLSLSRYSQSGNGLMVKPEIVLPGNSPHSSPFLDL RGSRHPCVTKTYFGDDFIPNDIFIGCTGNEEEESADNKKALAPCVLVTGPNMGGKSTLMR QCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILLHGT THSLVLLDELGRGTATYDGTAIASAVVKELSKRICCRTLFSTHYHSLVEDYAQDCAVKLG HMACMVENECDEDPSQETITFLYKFISGACPKSYGFNAARLAAIPEAVIRSGNCKAREFE KSIMALRIFKKVCSFAEDPTANREQFARLVQMIVNL NT seq 4251 nt NT seq  +upstreamnt  +downstreamnt atgtacgttcatgagactcggctgccgccccgcccacttcctctttgcactttcccgcga acagttatctgcacggcctgtgtggaagagaagcagcttcgcgtttcatacatcaatttt gtgcagctagtcatggcgaagcaaagttccatttttaatttctttacaaagtcgccgcca gcagtcgcgaaaacaaaacctaatccgtctccaactgaagcagacgtgccttctttagtg tctaaatccaacagttcccccaaggaggaagctaaacaagcagcccaaaacagtaagaag gctgcggccaaacccctcaagactctggctaaagtcggtcatgccaaaccttttggacag agagctacggatacaaatgagagctcttcattccccttccatgcgggtgatctggtatgg gcaaaactagaaggacacccatggtggccttgcatgatggtgccccagccggtgagtggg cagcagatgaagggcagaggccaagatcagagagtgcatgtccatttttttgatgaacca gcaacgcggggttgggtcagaaagaagtacgttcgacagtataaaggttcagatagcact gatgccaaaacaggtggcttgttcttcagtggcaagcctgtgattcgcagggcaatggag ttggcagaccgtgtgctgcaggacagtcccgaacaaagactaaagatgcctgtttgtatg gatgcctctgatgaggaagcagaggacgaagaaatggaggttgaacaatcaacaccatca gatgaagaaatatcagaagaagaggttcagaaggtgaagcctagcaggcgttcatcacgt gctgcagcagagcatgctcagaaacccaaacgtcggcgtattgtggtggcctctgacagt gagggctctggtgaggagttcaagccagatcaggcagatcaggcagaaaccagcagtgag gaggaagatggggtcataagtgatgtggaggagagtatacctgaatctgaacctgacagt cctgtgaagccagtaaaacggaaacgtgcatcagagaaaactgctaaaacaaaaagtaca gctataccctcagagattcacaagagcaattctgtgagtcttgcagctgacacaaagtca cgtctgtctgctttttcagctccagacagctttgagagtcagggcagtgcttcaggaaaa ttggatggggctggtgtgtgggaccatgaaaaattggattggttgcagaacggcaaaaga aaagatgctcgtaggaggcgtcagtcagatatggactatgacccaaccactctatatgtg cctgaagacttcctgaacaaggttacacctggcatgcgtcgatggtggcagctcaagtca gaaatgtttgatactgttcttttctataaagtaggcaagttttatgagctctaccacatg gacgctgtgattggtgtcagtgagttggggcttactttcatgaaaggcacctgggcacat tctggtttccctgagataggttttggccgtttctctgatgtgctcgtacaaaaaggttac aaggtggcacgtgtagaacagaccgagacccctgaaatgatggaagcacgatgcaaggct atggtgcgtcccacaaaatttgaccgtgtagttcggcgagaggtatgcagagtaatcacc cggggcacccagacgtatagtgtgctcgatggtgcgccttctgtggccgagagcaagtac ctgctgagtgtgaaagagaaaaatcaggaggaaaatgcaggccaataccacatatatggg gtctgcttcgttgacagctcaatgggtcgcttttatgtaggtcagttccaagatgaccgc ctctgttcccgtctgcgtaccttactggcacattatgtgccagcgcaggtgctttttgag aagggtaacttgtcagctgagacacagaagatcttcaaggccgctctgtcctcagcaatg cacgagagtcttagtgctggctcacaattctgggatgcccagaaaaccctgaaaaccttg gcagatgaagactactttaaagaaattaaaggagagagtagtaattcttcaggatcagtt ctccccagtgctctaaaagcaatgacttctgaaagtgactcgctaggtcttactcctaaa gaaggatatgaacttgctctctctgcacttgggggttgcatattctatcttaaaaaatgc ctggttgatcaagagcttctttccatggctaactttcaggaatatgttccagtggatgtg gagatacagcagtcggagaatgcatcaaatttctttgcccaaacttgccaacgtatggtg ctggatggagtgacactggccaaccttgagattctccagaatggttctactggaggcaca gaaggtactctgcttgaacagttggacacttgctgtactccttttggcaagaggctgtta aaacaatggctctgtggtcccctctgtaacccagcatccattaatgatcggttggatgct cttgaagacctaatggctgcaccagcccaagctactgaggttacagaactcctgaagaaa cttccagaccttgaaaggttacttctcaaaatccatagtatgggtactcctctaaaggga caggaccacccagacagcagagcagttttttatgaggagattgtctatagcaaacgcaag attgctgacttcctttcagcattggaagggttcaaaaccatgcaggaaattgtgtcaatc atggagtcagtctccgtaggatttcaatctaaattgctgcgacaagtagtgatcctaaaa acaagaagtgatgagggtatgtttcccaatcttagaccggagcttaaccgctgggacaca gctttcgaccatcaaaaagcacgtacgactggtgtgattacacccaaggctggctttgac ccagagtatgatcaggctctgagtgggatcaaggactgtgagagaaatctgcaagactac ttggatcgacagaagaagagacttggctgtaagaatctatcttactggggtacaggacgg aaccgctatcaaatggaggttccagacagtgtttctgagaggagcttaccagaagaattt gaggtgaggtccacaaagaagggctggaagaggtactcaacaaagcagcttgagcatatg ttctcagagttgcagagctgggaggacaaaagggacactgcactgaaagattgcatgagg cgactgttttataactttgataaaaactacaaagactggcggactgctgtggagtgcatg tcggttcttgatgtgctgttgagtttgtcccgatacagtcagagtgggaacgggctgatg gtaaaaccagagattgttctgccaggtaatagcccccattcttcccctttcctggacctc agaggatcccggcacccctgtgtcaccaaaacctattttggtgatgacttcatccccaat gacatctttattggttgtactggcaatgaggaagaggagagcgcagacaataagaaggca ctagccccatgtgtacttgtcacagggcctaacatgggaggcaagtccaccctaatgagg cagtgtggcctggttgtgatcttggcacagttgggttgctatgtgcctgctgaaagcctg cgcctaacccccgtggaccgagtattcactcgccttggtgcctcagatcgtatcatgtct ggagagagtactttcttcgtggagcttagtgaaacagccagtatccttttgcatgggacc actcattcacttgttcttctggatgaactgggtaggggtacggccacctatgatggcaca gccatagcaagtgcagtggtgaaggaactgtcgaagaggatctgctgccggactctgttt tccacccattaccactcactggtagaagactacgctcaagactgtgctgttaagcttggc catatggcctgcatggtggaaaatgagtgtgatgaggatcctagtcaggagaccatcact ttcctgtacaagttcatcagtggtgcttgtcccaagagctatggatttaatgctgcacgc cttgccgctatccctgaagcggtgattcggtcaggaaattgtaaagcccgtgagtttgag aagagcatcatggctctgaggatcttcaagaaagtgtgttcatttgctgaagaccccaca gctaatcgtgaacagtttgccagacttgttcagatgattgttaacctgtaa

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