Ictalurus punctatus (channel catfish): 108263457
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Entry
108263457 CDS
T04658
Name
(RefSeq) F-box only protein 11a isoform X1
KO
K10297
F-box protein 11
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108263457
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108263457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
108263457
NCBI-ProteinID:
XP_017319743
Ensembl:
ENSIPUG00000018693
UniProt:
W5UQZ1
LinkDB
All DBs
Position
3:complement(8603846..8643330)
Genome browser
AA seq
879 aa
AA seq
DB search
MNSVRAANRRPRRVLRPRPVPPERNNQERDEEGAGDMVAEESGPGAQNSPYQLRRKSLLP
KRSVYPAKTNMEGDPTSATENFGHRAKRARVSGKLQDITAVPAEQYLQVKLPDEVVLKIF
SYLLEQDLCRAACVCKRFSELANDPILWKRLYIEVFEYARPMMHPDSGKFYQINPEEYEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPSRYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVVIENTRDSTFVFMEGSEDAYVGYMTIKF
NPDDKSAQHHNAHHCLEITVNCSPIVDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDC
ENVGLYITDHAQGIFEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGY
FESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGV
WITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLVEGNDIYGNALAGIQIRTNSCPIVRHNK
IHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDN
GHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGLIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPVL
RKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEK
AVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFC
DCGAGTLSNSCTLAGEPTHDTDTLYDSAPPIESSTLQHN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagtgagagctgcgaaccgcagacccaggcgagtgttgaggccgcgcccggtg
ccgccggaaagaaacaaccaagaaagagatgaggagggtgctggagacatggttgctgaa
gaatctggtccaggagctcagaatagtccatatcaacttcgaagaaagtctcttttaccc
aaaagatctgtatatccagccaagactaatatggagggtgatcccacatcagcaacagaa
aactttggtcatcgggccaagcgtgctagggtgtctgggaaattacaagacataacagct
gttccggcagaacagtacctgcaagtgaagcttccagatgaggtggtactgaagatcttc
tcctatctgctggagcaagatctgtgtcgggctgcttgtgtgtgcaaacgctttagtgaa
ctggccaatgaccccattctgtggaagagactctacatagaggtttttgagtatgcccgt
cccatgatgcacccagactcaggaaaattttaccaaattaacccagaggagtatgagcag
cccaatccatggaaggaaagctttcagcagctgtataagggagcacatgtgaagccaggc
tttgcagagcacttttacagtaacccttccaggtataaagggcgggagaatatgctgtat
tacgacactattgaggatgcattaggtggtgtgcaggaggctcactttgatgggcttata
tttgtccactcagggatttacacagatgagtggatctatattgagtcgccaattactatg
attggtgcagcaccagggaaagttgcagataaagttgtcattgagaacactagagattca
acatttgtgttcatggaggggtcagaggatgcatatgtcggctatatgacaataaagttt
aaccctgatgataagtcagcccagcaccacaatgcacatcactgtttagagatcacagta
aactgcagccccatcgttgaccactgcatcatacgtagcacatgcacagtgggttcagcg
gtatgcgtgagtggccagggggcatgtcccactatcaaacactgtaacatcagcgactgt
gagaatgtaggcctctacatcacagaccatgcacagggcatttttgaagataatgagata
tccaataatgctctagctgggatctgggttaagaatcatggaaatcccataattagacga
aatcacatccaccatggtagagatgtgggagtctttacttttgaccatggcatgggctac
tttgaaagctgcaacatccatagaaaccggatagcaggatttgaagtgaaggcatatgcc
aaccccacagtagtgcgctgtgaaatccaccatggacagactgggggcatatatgtacat
gaaaagggaagagggcagttcattgagaacaagatctatgcaaacaactttgctggtgta
tggattacctcaaatagtgaccctacaattaggggtaacgcgatctttaatggcaaccaa
ggtggtgtttacatatttggtgatggccggggccttgttgaaggaaacgacatatatggg
aatgccttggcagggattcagatccggactaacagctgtcctattgtccggcacaacaaa
atccatgatggccaacacgggggcatttatgtgcatgagaaaggccaaggtgtgattgaa
gagaatgaggtctacagcaacacattagctggagtgtgggtaaccacaggaagcacacct
gtactgcgcaggaatcgaatacacagtggaaaacaggttggtgtttatttttatgataat
gggcatggagtgctggaagacaatgatatctacaaccacatgtattcaggagttcagata
aggactggaagcaacccaaaaataagaagaaacaagatctggggtggacaaaatggtggc
atccttgtttacaactccggtttgggcttaatagaagacaatgagatctttgacaatgcc
atggcaggggtttggatcaagacagacagcaacccaacacttcgtaggaataagatccat
gatgggagagatggaggaatttgcatattcaatggaggacgtgggttgttggaggagaat
gacatctttaggaatgctcaggcaggggtcctcatcagtaccaacagtcaccctgtactg
cgaaaaaacaggatatttgatggctttgccgcaggtattgagatcacaaaccatgcaact
gcaactttagaaggaaatcagatttttaacaaccgctttggtgggttgtttcttgcatcc
ggtgtcaacgtgacaatgaaagataataagataatgaacaatcaagacgccatcgaaaaa
gctgtgagccgaggacagtgcctgtataagatttccagttacaccagctatccaatgcat
gatttttacagatgtcacacctgtaacacaacagaccgcaatgcaatttgtgtgaattgc
atcaaaaagtgtcatcaaggacatgatgtagagtttataagacacgatagatttttctgt
gactgtggtgctgggacattgtcaaactcgtgcacgttagccggagagccaacacatgac
acggatacattgtatgactctgctcctcctatagagtccagcacactgcagcacaactga
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