Ictalurus punctatus (channel catfish): 108263473
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Entry
108263473 CDS
T04658
Symbol
zmp:0000000662
Name
(RefSeq) RING finger protein 145 isoform X1
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108263473 (zmp:0000000662)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108263473 (zmp:0000000662)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108263473 (zmp:0000000662)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-P11
RING_XB3-XBAT31
zf_RING_Vps8
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108263473
NCBI-ProteinID:
XP_017319769
Ensembl:
ENSIPUG00000008482
UniProt:
A0A2D0QN97
LinkDB
All DBs
Position
3:complement(14171437..14180724)
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AA seq
703 aa
AA seq
DB search
MKLFDGISAQSRCCGRVTQSPSLNYLDTMLRLEDVANVLLRVPSLLVLDLLYKCNIESFT
HHLRASSEDMLFKYKYVVWNIYYLGHFVSTVVLLLPLGHVVQIYLHVLTALLLYMGHQMS
REYVVGESQYGYDGALFLHPPALNRFVRALTCQIIVATLCAFLMRTRRVWLFSAHLIPLI
GRVCLVSQDNALMLTTVSMGITAAEVAIFLLMNLFVPYRLARATYWQITQTEVTDLYRLL
AVSMTLWHSFAVPMLFSAFWFVLFGVQVVSNFGSSTAIQEGLLLYLLTSVSECCASPYSL
LGLTFMVSYLALGLLNLCKFCLGGFTALQNHNVMHRGVTEGVTLLLLGLQTGLLDLPALQ
RCFLLFIILFIILTSTLQSMSEITEPIVLGLGASRNRCVWKHVRGLGMCVFLLLFPGFMA
FKLSQFFHMDFWLLILVSSCMLTSLQVTGTLLIYCLFMVEVWRGAALPSLDEVVYYVNAV
CRALEFAVALCVVAYGAWESLWGEWSWIGASVIIIHSYCNVWLRAQAGWKSFLLRQEAAR
KINSLPRASAEQLQEHSDVCAICFQDMTSAVITYCGHYFHGNCLRKWLYVQETCPMCHTP
IKPSTSNPNPAAGDAQSNPPQTQPHPPQQEPATEHTDTHQAEQGPVEDVVHSPDKTSESE
PPPRTKGLQNLNCSASGDTSGPGCSLEGNPCNERNWESEQRTN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcgacggcatctctgcacagagtcgttgctgtggacgggtgacgcagagt
ccgtcgttaaattacctcgacacaatgctgcgactagaggacgtggctaatgtgttgctc
agggtgcccagtctcttagtgctggacttgctctacaaatgcaacatcgagagcttcacc
catcatctcagggcgagcagcgaggacatgctcttcaaatacaaatacgtcgtctggaac
atttactacttaggtcactttgtgagcacagtggtgttgttattgcctctgggacacgtt
gttcaaatttacctgcatgttctcactgctcttctgctctacatgggacatcagatgtcc
agggaatatgtcgtgggggagagtcaatacgggtatgacggagcactcttcctgcatcca
ccagccttgaaccgatttgtgagggcacttacatgtcagattattgttgccactctgtgt
gccttcctcatgcgcactcgccgtgtatggctgttctcggcacacttgatcccactgatt
ggacgggtgtgtttagtttctcaagacaatgccctgatgctcactactgtttccatgggg
ataactgcggctgaggttgccatcttcctcctcatgaatctgtttgtcccatatagattg
gccagggccacatactggcaaataacacaaacagaggtgacggatttgtaccggttgtta
gcggtcagcatgacactctggcatagctttgctgtgcctatgttattcagtgcattctgg
tttgtactgtttggagttcaggttgtctctaattttggcagctccactgccatacaagag
gggctgctgctctacctcctcaccagtgtgtctgagtgctgtgctagtccttactctctg
ctgggtttgacatttatggtttcttatttggcactgggcctcctgaatctctgcaagttc
tgccttggaggattcacagcgctgcagaaccacaatgtcatgcacaggggtgtgacagag
ggtgtgactctgttgttgttgggcctacagactggcttgttggacttgccagccctgcaa
cgctgcttcctcctctttatcatactctttatcatcctcacttccacactgcagagcatg
agtgagataactgagcccattgtgctaggacttggggccagtaggaacaggtgtgtgtgg
aagcatgtgcgggggctgggcatgtgtgtattcctgctgctttttcctggattcatggcc
tttaagttatcccagttcttccacatggatttctggcttctcatcctggtttccagctgt
atgcttacatcactgcaggtgaccgggaccctattaatctactgcttgttcatggtggag
gtgtggcgtggtgctgctctgcccagccttgacgaggtggtgtattatgtgaacgctgtg
tgtcgggcattggagtttgctgtggcactgtgtgtggttgcatacggggcatgggagtca
ctgtggggtgagtggagctggataggggcatcagttatcatcatccactcctactgcaac
gtgtggcttcgtgcccaggctggatggaagagcttcttgcttcggcaggaagccgcacgc
aagatcaactcgctcccacgggcgagtgctgaacagctgcaggaacacagtgatgtctgt
gccatctgttttcaggatatgacatctgctgtgataacctactgtggtcattatttccat
ggaaactgtcttagaaagtggctatatgttcaggaaacctgtcccatgtgccacactccc
atcaaaccatctacatccaacccaaaccctgctgcgggtgatgcccaatcaaacccacca
cagacccaaccccacccacctcagcaagagccagctactgaacacactgacactcaccaa
gcggagcagggcccagtggaagacgtagtccattcaccagataagacgtctgagtctgag
ccaccacccagaacaaagggtctacaaaatctgaactgtagtgccagtggagacacttct
ggtcctggctgctcattagaaggaaatccctgcaatgagagaaactgggaatctgagcag
aggactaactag
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