Ictalurus punctatus (channel catfish): 108263483
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Entry
108263483 CDS
T04658
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108263483
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108263483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108263483
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108263483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
108263483
NCBI-ProteinID:
XP_017319793
Ensembl:
ENSIPUG00000016084
UniProt:
A0A2D0QMR5
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Position
3:26520787..26536843
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AA seq
915 aa
AA seq
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MAGALRMDGNQYGMKNFDNGFDMDISYHQLMSTFDIKSEPCIPETVHGPYLQIIEEPKQR
GFRFRYECEGPSHGGLPGASSERNRRTYPTVKVFNYVGHARVEVQLVTHTEPPRVHAHSL
VGKQCNENGTCSIDVGPNDLTAQFSNLGILHVTKRGVVDVLTKRLKEEKKRAKQPGYHFS
DTEEQAIVREAKELGKSMDLNIVRLKFTAYLKDSNGAFTRALKPVVSNPIYDSKSPNASN
LKISRMDKTCGSVMGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAYGDFSPTDVHKQYA
IVFKTPPYHKEIERPVTVFLQLKRKKGGDCSEPKQFTYVPQYPDKEEVQRKRMKALPQPY
DHWRGPQGGAGGLGRGAGGFGGPGGGGGGGLLGAGFQFNNVDGTGYYGGSCGGFSGGTQM
AGSAPHPDNAQEKQQQQQEMPTSLAAQQQLVQIASALQKHSTAAAKLSAKALLDYCSTGD
VRFLLAMQRQLCGVQDENGDTPLHLAIIHQQPEVATKLIQTIIKTPQFKFINKFNHLNQT
PLHLAVITQQPKLVEILLRVGADPTLLDSDGRTAVHLAAHAGDEAVLRVLLNMLEERHSH
LLNTADFSGLYPLHLAVRKGGERCLRVLVEAGAKINMPEQKSGCTALHLAVKENLFKVVC
SLITELKADINACTFGGNSPLHLAASLGSPPLCSMLIAAGADKQLENDEPLFCYSSSSDE
EDQGERRDDGEGPVEKDIAEHVQELSISSERSRVNPRKRPAVGHTPFDLANCQKVKDLLD
STKPNHLSSKKTKKSTEEVSQSLDNETVNKLCGILNKCQVPWKELAEKLGMLTLAHLYTD
SPSPCQNLLENYQLSGGPIEGLVDALQSLGLKEGVQLLRARQPSEDKQSADTTVDSGFGS
QEADTSAVDNDCETN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctgagaatggacggaaatcagtacggcatgaaaaattttgacaacggg
tttgatatggacatctcctatcatcagttaatgtccacgttcgatattaaaagtgaaccc
tgcattccagaaacagttcatggaccttacttacagataattgaggagcccaaacaaaga
ggcttccggtttcgttatgaatgtgagggtccatctcatgggggtctaccaggcgcatcc
agtgagaggaacaggcggacatatcccactgttaaggtgtttaactatgtgggtcatgct
cgcgtcgaggtgcagctcgtgacacacaccgagccgcctcgtgtccatgcacacagcctt
gttggaaaacagtgcaacgagaacggaacgtgcagcatagacgtgggtcctaatgacctc
acagcacagttcagcaatttgggtattcttcatgtcactaaaagaggagtggtggatgtt
ctgacaaagagactgaaagaagagaaaaagagagcgaagcagcctggataccattttagc
gatacagaagagcaggctattgtgcgagaagcaaaagagctgggcaagagcatggacctt
aatatagtgaggttaaagtttacagcttaccttaaggacagcaacggagcattcaccaga
gctttgaaaccagtcgtgtccaaccccatctacgacagcaaatctcccaatgcgtccaat
ctcaagatctcacgcatggacaagacttgtggctcggtgatgggaggggatgagatcttc
cttctgtgcgacaaagttcaaaaagatgatattgagattcgtttctatgaggaggatgat
gagggaggctgggaagcatacggtgatttctctcccactgatgtacacaaacagtatgcc
attgtctttaaaacgccaccatatcacaaagagatcgagcgacctgtcactgtctttctg
caactcaagaggaagaagggtggggactgcagtgaacccaaacagtttacctacgttcca
caatatccagataaagaggaggttcagcggaagaggatgaaggctcttccacaaccctat
gaccactggcggggaccacagggtggagcagggggcctgggcagaggagctgggggcttt
ggaggtcctggaggaggtggaggaggaggattattgggagcaggatttcagtttaataat
gtggatgggacgggctactacggtggcagctgtggtggattttcaggaggaacgcagatg
gcaggatctgcaccacatccggataatgcccaggaaaaacagcagcaacagcaagagatg
cccaccagcttagctgcacagcaacaactcgttcagattgcctcggctctacagaagcac
tccaccgcagcagccaagctcagtgcaaaggccctgttggattactgcagcacaggggac
gtacgcttcctcctggccatgcagagacaactttgtggagtacaggatgagaacggagac
accccattacacttggccattatccaccagcagccagaagtggccacaaagcttattcag
actatcataaagactcctcaattcaaattcatcaacaagttcaaccacctcaaccagacc
ccgctgcatttggccgtgatcacccagcagcccaagctggttgagatcttgctaagagta
ggagcagaccctaccttactggacagcgacggacggacagcagtgcatctggctgctcat
gccggagacgaggccgtcctgagagttttgctaaacatgctagaagagcgccattctcat
ctgcttaacaccgctgacttctcaggtctgtacccactgcacctggctgtgagaaaagga
ggcgagcgctgcctgcgtgtgctggtggaggccggggccaagatcaacatgcccgaacag
aagagcggttgcacagcgctacacctggctgttaaggagaaccttttcaaagtggtctgc
agtctcattactgagctgaaggctgacattaacgcatgtacgtttggaggaaacagtcca
ctgcatctggctgccagtctcggctctccacccctctgctccatgcttatagcagcaggc
gcagataaacaactggagaatgatgagccactcttctgctactcctcctcctctgatgag
gaagatcagggtgaaaggagagacgatggagaaggaccagtcgagaaggacatagctgag
catgtacaagaactgtcaatatcatctgagagaagtcgagtcaacccacgcaagagacca
gcagttggacacactccttttgacctggccaactgtcagaaggttaaagatctgttggat
agtacaaagccaaatcacctttcatccaagaagacaaaaaagagcactgaagaagtgagc
cagtctctggacaatgaaacagtcaataagctgtgtggaatcctcaacaaatgccaagtg
ccatggaaagagctggcagagaaactgggcatgctcaccctggcacacttgtacacagac
agcccctccccctgccagaaccttctagaaaactaccagttaagtggtggtccaatagag
gggctggtggatgcgttgcagtctcttggtctgaaagaaggggtccaacttctgagagcc
aggcagcccagtgaggacaagcagagcgcagacacaacagtggacagcggctttggcagt
caggaagcagacacttcagctgtggataatgactgtgaaacaaactga
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