Ictalurus punctatus (channel catfish): 108263541
Help
Entry
108263541 CDS
T04658
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108263541
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
108263541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
TPR_24
PPR_3
PPR_long
PPR_1
TPR_MalT
DNA_alkylation
Unstab_antitox
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
108263541
NCBI-ProteinID:
XP_053535578
Ensembl:
ENSIPUG00000009406
UniProt:
A0A9F7THK3
LinkDB
All DBs
Position
3:13576198..13644312
Genome browser
AA seq
1430 aa
AA seq
DB search
MAALLRSIRLLKLSPSPLLRVKRNSHGPPINRLYSRAVGGRGVEACPRQIALRCAGASRS
AWSSLGLRCFSAAVERKDEPSIALRTKQAQQFDWALAKLDSSVRRTGRVTKTLIQRIFHD
ICRTGYPSSNQALLLLRSCGSLLPEMPLEERSQLAHRIWEKLQELGATYDVSHYNALLKV
YLQNEFNFSPTDFLGKMEAANVQPNRVTYQRLIAAYCQNGDIEGASKILGFMKSKDLPIT
EAVFNSLVTGHSRAGDMESAENILSVMRGAGIEPGPDTYLALLVAYAEVGNMTKIKETLN
TAQSKDANLMDRDLMQVVFSLAKAGHQQYVPEIVECMRHERGYVPDAMNLCLSLTTQGLE
DTAFTVLKTFPGLHTELQDGETLNMGNFFLRHCVNMNKCPEKLVNFCTQLKASNLHSSPL
QFTLYCALESKNTAMAVEVMKKMKEEGLPIRPHYFWPLLTKHQKDRDTAGTLEVLKAMQD
LNVHLDVDTYSTYVLPTFSSVDSARVALQDAGCAVDTDDFVAAEVRTVAASGRLAELYSL
LSSPSFPAVSLSSFRGSLISGFRGSKDVESMAKITELLYKDSRFAQADADRAETTAYFLF
NLFDGMTETEVQAKEEVLREYLNQLSKMNIIIHVNIYRGIRNILNSYHVPELIKDVLAIV
DKQTREDDGTESKVFEGKLAIQERRLEDLKSKGKPVGNVLRQVIAAVCAEENLAHALELK
AQYENEMTASCYALLINLCCRHDNPDEALNLKRELARKDSEVTLDANKYMSLVRVLSKHG
RVEEAVDILKEMKEKNVTILDTTTTRLFHTLNTAALKGDIATIRRLQDTVFTLGLVKPTS
NLCSPLVSAYLESGDVIGALEASMECQKQYNQMPRIHDVICRLVEKGETEPLQKAMDFVS
QERGEMMMLYDLYFAFLQTGRYKEARKILETPGLRARAGRLQWFAEKCIASQQMEPLENM
VDMTAKLFECDRDEMYHYMLRLCKDINDWQKADACWTKMQEENVIPRERTLRLLADILKS
NNQEVPFDMPEMWYEQPESEEHSEDAKEESFKVKESTGSTASFSKETKPHDYHLTVMTLS
KKGKVEEAFKVVKETHRKGLALGAGSYDILIRALLARGNLKDAMEIKYIASKHIAGFKLS
EMANNLHIVTLVKQGDIEGAMASLKDMLQTDQVPSHLAITRLVQGLGNHGDMEGIQEVES
LVKNLGPSVNLSYMLFANNKAMAHIKNGDIDSAVEGLEALYTQNSDGPQKSIAFVFRKVL
EANNGDALDKLSAMAERLCNHFATYRPATDLFLQYLDMGRIEDARFLLQRCSAVAEQKEI
MMAYMSKVSQEPGQSPKITNLVELIPDLDKEKVCTFLLKCSSVDKDLTSAKAVYQQMQDE
GLQVNELSLKRLALLYKNAGEAVPFEEPPETFKFYADKLKALQAQSSTDN
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctcttaagatctattcggctgctgaaactctcaccttctcctttgctacga
gtaaagagaaacagtcatggacctccgattaatcgcttatacagcagagcggtcggcggg
agaggagtcgaagcttgtccgagacaaatcgcgttaagatgtgcgggtgcgagcaggtct
gcgtggtcctctctgggtctgcggtgtttcagtgcagccgttgagaggaaagatgaacct
agtatcgctttacgcaccaagcaggcccagcagttcgactgggctcttgctaaactagac
agctcggtcagacggaccggtcgagtcaccaaaacactgattcagcgcatctttcatgac
atctgtcgaacaggataccccagtagcaatcaggccctgctgctgctgaggagctgtggc
tcactgctgcccgagatgccccttgaagagcgcagtcagctggcccaccgcatctgggag
aagctacaggagttgggtgccacgtacgatgtgagccattacaacgcgttgcttaaagtc
tacctgcagaatgagttcaacttctcgcccactgattttcttggcaagatggaagcggcc
aatgtgcagcccaacagagtgacgtatcaaagactgattgcagcgtactgtcaaaatggt
gacattgaaggcgcgagtaaaattctgggcttcatgaagagcaaagacttgcccatcaca
gaggccgtgttcaactctctggtgacgggccacagccgagccggagacatggagagtgca
gagaacatcctgtctgtcatgagaggggcgggtattgagccaggcccagacacttacctc
gctttactcgtggcttatgctgaagtgggaaacatgaccaaaatcaaggagactctgaac
acggcgcagagcaaagatgccaatctgatggaccgagacctgatgcaggtggtgttcagt
ctggctaaagctggccatcaacagtacgtgcctgaaatagtggagtgcatgcggcatgag
cgaggctacgtgccagatgcaatgaacctgtgtttgagcctgaccacacagggccttgaa
gacactgcatttactgtgctgaaaaccttccctggtctacacacagagttacaagatggt
gaaactctaaacatgggcaacttcttcctccgtcactgtgtgaatatgaataagtgccct
gagaagttggtcaatttctgcacacaactgaaggcttccaacctgcactcttcaccactg
cagttcactctgtattgtgctctggagtccaagaacacagctatggcagtagaggtgatg
aagaagatgaaggaggaaggacttcccataaggcctcactacttctggccccttttaacc
aagcatcagaaagacagagacacagcagggactctggaggtgctgaaggccatgcaagat
ctgaacgttcaccttgacgttgacacttactccacctacgtgctgcctactttctcctca
gtggacagcgcccgtgttgctcttcaggacgccggctgtgcggtcgacactgacgacttc
gttgcagcagaagtgcgaacagtggcagcgagtggaagacttgcagaactctactctctg
ttgtcttcaccctcgtttccagctgtttcccttagctctttcagaggaagcctgatcagt
ggctttagggggtcaaaagatgtggagagcatggccaagatcacagagctgctttataaa
gatagccgctttgctcaggctgacgcagaccgagcagaaaccacggcctacttcctcttt
aacctgtttgatggaatgacggagactgaggtgcaggccaaagaggaggtgttgagagaa
tatctcaatcagctcagcaaaatgaacatcatcattcatgtgaacatctacagaggaatc
aggaacatcctcaactcgtaccacgtgccagagctaattaaggacgttcttgctatcgtg
gacaaacaaacaagggaagacgatggcactgagtcgaaggtttttgaagggaaactagcc
attcaggaaagaaggctggaggacttgaaatccaaggggaagccggttggaaatgtgttg
aggcaggtcatcgctgccgtgtgtgctgaggagaacctggcccatgctctggagctgaaa
gctcagtatgagaatgaaatgactgccagttgctacgccctgctcatcaacctgtgctgt
cgtcacgacaacccggatgaagcactgaacttgaagagagagctagcccgcaaggactcc
gaggtcacgctggatgccaacaaatacatgagcttggtcagggtgctatccaaacatggc
agggttgaagaggcagtggacatcctgaaagagatgaaagagaagaatgtgactatattg
gacaccacgacaaccaggttgttccacacactcaacacagccgctctgaagggggacatc
gccaccatccggcgcctgcaggacacggtgttcaccttaggcctggtcaaacccaccagc
aacctctgttcaccattggtttctgcttacctggagagtggggatgtgattggagctctg
gaggctagcatggagtgccaaaagcagtacaaccaaatgccccggattcatgacgtcatc
tgtcgcctagtggagaaaggagagactgagccactgcaaaaagctatggattttgtgagc
caggagcgtggtgagatgatgatgctgtacgacctttacttcgctttcttgcagacgggc
cgctacaaggaggcacgcaaaatccttgagacccctggtttaagggcaagagctggtcga
ctacagtggtttgcagagaagtgcattgcatctcagcagatggagcctcttgaaaacatg
gtggatatgactgcaaagctttttgaatgtgacagagatgaaatgtaccactacatgctg
cgcctctgcaaggacataaatgactggcaaaaggcagacgcttgctggactaagatgcag
gaggagaatgtgattcccagagaaagaaccctgcgccttcttgctgacatcctcaagagc
aacaaccaggaggtgccctttgacatgccggagatgtggtatgagcaacctgaatccgag
gagcattctgaggacgccaaggaggagagtttcaaagtgaaagaaagtactggttccaca
gcatctttttcaaaagagactaaaccccatgattatcacctcactgtgatgactctgagc
aaaaaggggaaagttgaagaggcctttaaggtggtgaaggagacgcacaggaagggtctg
gctctgggagctggttcatatgacatcctcatcagggccctattggccagaggaaacctg
aaggatgccatggaaataaaatacattgcttccaaacacattgcaggattcaagctgagc
gaaatggccaacaacctccatatagtcacactggtaaagcaaggagacattgaaggagcc
atggctagtctaaaggacatgctacagactgaccaggtgccctcccatctggccattact
cgattggtccagggcctgggtaaccacggagacatggagggcatccaggaagtggagagc
ttggttaagaatttagggccctctgtcaacctatcctacatgctgtttgcgaacaacaag
gctatggctcatatcaaaaatggggacatcgacagtgcagtggaagggcttgaggctttg
tatacccaaaactcagacggtccacaaaaaagtattgcctttgtcttccgtaaagtcctc
gaagccaacaacggtgatgcacttgataaattgagtgccatggcggagcggctgtgtaat
cactttgccacctacagacctgccacagacctcttcctgcagtacttggacatgggcagg
atagaggacgccaggttcctgctgcagcgatgttcagcagtggctgagcagaaggagata
atgatggcttacatgagcaaagtttctcaggagccagggcagtctcccaagataacgaat
ctggtcgaactcatcccagacttggacaaggagaaagtttgcaccttcctgttgaaatgc
tctagtgtggataaagacctgacctcagccaaggctgtttatcagcagatgcaggatgaa
gggctgcaggtgaacgagctgtctctcaagagactggcgcttctgtacaagaatgccgga
gaggccgtgcccttcgaagagcctccggagacattcaagttctatgcagacaagctgaag
gccttgcaggcccagagttcaacagataactag
DBGET
integrated database retrieval system
