Ictalurus punctatus (channel catfish): 108263579
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Entry
108263579 CDS
T04658
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108263579
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108263579
Endosome - Golgi transport
Rab GTPases and associated proteins
108263579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Staph_reg_Sar_Rot
CP2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
108263579
NCBI-ProteinID:
XP_017320032
Ensembl:
ENSIPUG00000005781
UniProt:
W5U6A6
LinkDB
All DBs
Position
3:complement(30696180..30751063)
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AA seq
1253 aa
AA seq
DB search
MWLHPEEVLLAGALWVTERANPYFILQKRKGHGEGGGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLVYWAIAHGSSRREITEHWEWLEHNLLQTLSIFENENDITTFVKGKIQGII
AEYNKNHDNKEDDDTDKFKEATAKFRRLFGMPDEEKLVNYYSCSYWKGRVPRQGCLYLSI
NHLCFYSYLLGKEAKLLVRWADITQLEKNATLLLPDMVRVSTRCNEHVFSVFLNINETFK
LMEQLANIAMRQLLDNKGFEQDRSLPKLKRKSPKKVSALKRDLDARAKSERYRTLFRLPK
DEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETMCSLIIPLREVTIVEKADSS
NVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTSSKIYFEREITSSFTSSDDEV
YSQHSSLLSCSPQRSSLGSEGESERQFNLNDNSVPTATQALMTMYRRRSPEEFNPKLAKE
FLKEQAWKNHFAEYGQGVCMYRTEKTKELVLKGIPENMRGDLWLLFSGAINEMATHPGYY
EDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEIGIAALRRVLTAYAFRNPNIGYCQA
MNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARVHVPQLYD
CMQELGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKLIFQLALSVLDANIHQLL
NCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDDGEPHPEVDIFKLVRSSYEKFG
SIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYSLFKAEHLTSC
YWGGTSNPMDRHDPSLPYLEQYRMDLEQFKGLFSVLFPWASGTHTDGLAVRFFRLLDQNA
DALINFREFINGLGVLCHGDLTEKLKLLYKMHILPDVHHEQDEPDSAFEATQYFFEDITP
ETSNGLVSKSRSEKDDGFVRVTFKNEKVKKMQTPDYRTYLRLWNQETKSKTENMKDLPKL
NQGQFIELCKTLYNMFSEDANEQELYHATATVTSLLLEMGEVGKLFCSPSSKEDDADDEE
EDEDEERATTVRCRKQQRTREDSLNRSVEGKIPNTAPMEDIKLDESPKDTGASSAMLVSD
DETKDDTSVSSYSVLSAGSHEMDEKLQCEDIAEDTVLVRSGAGGEGIPHSASIDKDWAIT
FEQFLASVLTEQALVRYFEKPMDTAARIANAKNVRKAGQTHTSVSDYEISLSG
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtggctacacccggaggaggtgttgctggccggtgcgctttgggtcaccgagcgcgca
aacccatacttcatcctgcagaagaggaaaggacatggagaaggaggaggaggattagct
ggtttgttggtggggactctggacgtcgtgctggactccagtgcacgtgtggctccgtac
aggatcctttatcagacgcctgactcgctggtgtactgggcaatcgcccacgggagctcc
cgtagagagatcactgaacactgggagtggctggagcacaacctcctgcagacgctgtct
atattcgagaatgagaacgacatcactacctttgtcaagggcaagattcagggtatcatt
gctgaatacaacaaaaatcatgacaataaggaggacgacgacacggacaagttcaaggaa
gccactgctaagtttcggaggttgttcgggatgccagacgaggagaagctggtgaactac
tactcctgcagctactggaagggtcgagtccccaggcaaggctgtctctacctcagcatc
aaccacctctgcttttactcttacctgctcggcaaggaggccaagctgttggttcgctgg
gctgacatcactcaactggagaagaacgccaccctgctgctgccggacatggtgcgagtg
agtactcgctgcaacgagcacgtcttctccgtgttcctcaacatcaacgagacctttaag
cttatggagcagctagccaacatcgccatgcgccagctcctggacaacaagggcttcgag
caggatcgctcactgcccaaactcaagaggaaatcgcctaagaaggtgtcagccctcaag
agggatctggacgccagggctaaaagtgaacgataccgcacgctgttccgcctgccgaaa
gacgagaagctggatggacacacagactgcacgctgtggactcctttcaacaagatgcac
atcctgggccaaatgttcgtctccaccaactacatctgcttcaccagtaaagaggagacc
atgtgcagcctcatcatccccctccgagaggtgaccattgtggagaaggcagacagctct
aatgtgttacccagcccactatcaatcagcaccaagaaccgaatgaccttcctgttcgcc
aacctgaaagaccgcgacttcctggtgcagaggatctctgacttcctgcagcagacctcc
tctaagatctacttcgagcgagagatcacaagcagcttcaccagctcagacgatgaggtg
tactcccagcacagcagtcttctctcctgcagtccacaacgcagcagtctgggctcagag
ggcgagagcgagcgccagttcaacctcaacgacaacagtgttcccacggcaacacaggcc
ctcatgaccatgtaccgtcgtcgctcgcctgaggagttcaatcccaaactggctaaggag
ttcctgaaagagcaggcctggaagaatcactttgcagaatacggccagggagtgtgtatg
taccgtacggagaagaccaaagagctggtgcttaaaggcatcccagagaacatgagagga
gacctgtggcttctgttctctggggcgattaatgagatggcgactcaccctggctactat
gaggacttggtggaaaagtcgatggggaagtataatttagcaacagaagaaatcgagcgc
gaccttcaccgctcgctacccgaacacccggcctttcagaacgagattggcatcgccgca
ctgagacgagttctgactgcatacgccttccgcaaccccaacatcggctactgtcaggcg
atgaacatcgtgacgtcggttttgctgctctatgctaaagaggaggaagctttctggctg
ctggtagcactgtgtgaaaggatgcttccagactactataacaccagagtcgtgggtgcg
ttggtggatcagggtgtgttcgaggagttggcccgtgtgcacgttcctcagctgtacgac
tgcatgcaggagctgggtgtgatctccaccatctctctgtcctggttcctcacgctcttc
ctgtccgtcatgccgttcgagagtgccgtggtggtggttgactgcttcttctacgaggga
attaagctcatctttcagctggcgctgtccgtgctcgacgccaacatccaccagttactc
aactgcaaggacgacggagaagccatgacggtactcggcaggtatctagacagtgttacc
aataaggacagtacccttcccccaatcccacacctgcactctctcctcactgatgatgga
gagcctcatcccgaggtggacatctttaaactggtccgcagctcctatgagaaattcggc
tctattcgggcggacgtgatcgaacagatgcgtttcaagcagaggctgagggtcatccag
actatagaggacacgactaaacgcaacgtggttcgaactatagtaacagagacagcgttc
agcatagatgagctggaagagctttactcattatttaaggccgaacacctgaccagctgt
tactggggcggcacgagtaacccgatggaccgtcatgacccgagtctgccctacctggag
cagtaccgcatggacctggaacagtttaaggggctgttctcggtgctctttccctgggcc
agcggtacacacaccgatggcctggctgtccgcttcttccgcctgctcgaccagaacgca
gacgctctcatcaacttccgagagttcattaacggcctcggtgtcctgtgccacggtgac
ctgactgagaaactaaagctcctctacaagatgcacatactgccagatgtacatcatgag
caggatgagccagattcggcttttgaggccacacagtacttctttgaggacatcacccct
gagacttccaacggcctcgtctctaagagcaggagcgagaaagatgacggatttgtcaga
gtcacgttcaagaatgaaaaagtgaagaaaatgcagacgccggattatcgtacgtacctg
cgcctgtggaaccaggagacaaaatctaaaaccgagaacatgaaggatctcccaaaactc
aaccagggtcagttcatcgagctgtgtaagacgctgtataacatgttcagcgaggacgct
aatgagcaggagctgtaccacgccacagccacggtgaccagcctgctgctggagatgggg
gaggtgggaaagctcttttgcagcccctctagcaaggaggatgatgccgacgatgaggag
gaggacgaagacgaggagcgggccaccaccgtaagatgcaggaagcagcagaggactcgg
gaggattcgttaaaccgctccgttgaaggcaagattcccaacacggcgcctatggaggac
atcaagctggacgaatcacccaaagacacaggtgcatcttcggccatgctcgtctcagat
gacgagaccaaagacgacacgtccgtgtcctcgtactcggtgctgagtgccggctcacac
gagatggacgagaagcttcagtgtgaggacattgctgaggacacggtgctggtgcgcagt
ggtgccggaggagaggggatcccacacagcgccagtatcgataaggactgggccataact
tttgagcagtttctggcctctgtgctcactgaacaagctttggtgcgctactttgaaaaa
cctatggacaccgcggctcgcattgcgaacgctaagaacgtgcgtaaggcggggcagacg
cacacgtccgtcagcgattatgagatctcgctctcgggctaa
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