Ictalurus punctatus (channel catfish): 108263580
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Entry
108263580 CDS
T04658
Symbol
noto
Name
(RefSeq) homeobox protein notochord
KO
K24876
homeobox protein notochord
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108263580 (noto)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108263580 (noto)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108263580
NCBI-ProteinID:
XP_017320035
Ensembl:
ENSIPUG00000006256
UniProt:
A0A2D0QRC6
LinkDB
All DBs
Position
3:15468660..15470988
Genome browser
AA seq
253 aa
AA seq
DB search
MQIPARPLGPYGFSMRPQATHHPDYASSACLATAAKPSAGKSFTIDALLAKPDTTENSKT
SPFQSSLNPAPTPPGLFLHAGQMCPPLPHYLYSSAMMHTQPSYPVYCCPPYGYQTTCTGA
VYSQGATLSKAGVHSHYKHKGGKSKRMRTSFTNEQLSRLEKEFARQQYMVGSERFLLASA
LQLTEAQVKVWFQNRRIKWRKQSLEQQQAKLAKLGLAIPPKSPGSQGREDEGDEDEHDFT
EDSDVDIDDSLHA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccctgcacggcctctcggaccctacggattttcaatgcgtccacaggctact
caccacccggactatgcgagcagtgcgtgtctggccactgctgcaaaacccagcgcgggg
aaatccttcaccattgacgctcttctcgccaagcctgacaccaccgaaaacagcaagacg
agtccatttcagagctcactgaaccctgcgccaacaccaccaggtctctttctacatgcc
ggacagatgtgtcctccacttcctcactacctgtatagctcggctatgatgcacacacaa
cccagctatccagtctactgctgtccgccctacggataccagacaacatgcacaggagct
gtttactcacaaggtgccacactgtctaaagcaggagttcactcgcactacaagcacaaa
ggtgggaaatcaaagcggatgcgcacgagcttcaccaacgagcagttgtcccgtttggag
aaggagtttgcgcgccagcagtacatggtcggatcagagcgtttcctgctcgcatccgca
ctccagctcaccgaggcgcaggtcaaagtctggttccagaacaggcgcatcaagtggaga
aagcagagtcttgagcaacagcaggccaaacttgctaaactgggtctcgcgattccgccg
aaaagccccggatctcaaggccgcgaggatgagggggacgaggacgagcatgatttcaca
gaggactctgatgttgacattgacgactccctgcacgcctga
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