Ictalurus punctatus (channel catfish): 108263586
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Entry
108263586 CDS
T04658
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108263586
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108263586
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
Others
108263586
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Other cilium assembly proteins
108263586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
Beta-prop_WDR11_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_IFT140_1st
TPR_GEMI5
WDR54
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
108263586
NCBI-ProteinID:
XP_017320048
Ensembl:
ENSIPUG00000015297
UniProt:
W5UD16
LinkDB
All DBs
Position
3:7371756..7500511
Genome browser
AA seq
1248 aa
AA seq
DB search
MIPYTVNIKLAARTLTGTLSLQNKTAVDWGWQGLIAQGCHSSILIIDPKTAQTIQVLERH
KANVVKVKWSRENYHHNLSSPYSLRLASADAAGKIIVWDVVSGMAHCEIQEHSKPIQDMD
WLWNQDASHDLILAVHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNLALLTSE
GIVFITDFSPSKPPGSSGKKVYIASPHSSPAHSKPAATHPTGAKKALNKVKVLITNEKPM
AEAVTLNDCLQLSYLPSKKSHMLLLYPREILILDLELSQTVGVVAIERSGVPFMQVIPCA
QRDALYCLHDNGCVTLRVCRSTALSAEETAVPSETEQGVQELSYDLRSQCDAIRVTKTVR
PYRAVICPVNENRAALVVSDGRIMLWELKAHTGKVSSNLSSGLSPLYSPVNFCGTPLGQN
QKRIPDLSLNSMIGPTLISGVDPPVSMVGQQEVQLKFLLTGLLSGLPLPPFSLRMCPPLT
TKNIQHYQPLLAVGSSNGSVLVYNLTSGLLHKELSVHSCEVRGIEWVSLTSFLSFATSAP
NNLGLVRNELQHVDLRTGRCFAFRGERGNDEPAIEMIKVSHLKQYLVVVFRDKPLELWDV
RTGTLLREMAKNFPSVTALEWSPSHNLRSLKKKQMAAREAMARQTTLADAEQSSVESSVI
SLLQDAESKAETSQGISAREHFVFTDTDGQVFHITVEGNTVKEGARIPPDGSMGSIACIA
WKGDTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGAEVW
DTKEVQMVSSIRVGRNVSYRILDIDWCTSDKVVLASDDGCVRVLEMAMKSASYRMDEQDL
TDPVWCPYLLLPRAALTLKAFLLLQPWSGTFTMDITQVDYQEKDEIKGLVQEQLNSLSND
VKSVLQDPELNLLQRCLLVSRLFGDESDLQFWNVAAHYIKSFSQARQLSVPTPDGQTQPE
CSQSTTQCHLDICHDILCESSFFQRFQLERVHLQEVKRSSYEHTKKCADQLLLLGQTDRA
VQLLLETSAENPSYYCDSLKACLVTTIPSSGPSQSTIKLVATNMIASGKLAEGVQLLCLI
DKAADACRYLQTYGEWNRAAWLAKVRLNPTEASDVLKRWAEYLCSSQVNQKSKAILVLLS
LGCFQKVGEMLHSMRYFDRAALFIEACLKYGVMEANDTTNKLIGAAFSSYAGLLRSVGLR
EGAALWASKAGGAGEELLEELFQNEGSGSDVSPGEEEKKSSLGVTESL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgattccgtacactgtaaacattaaactagctgcacggacacttaccgggactctcagt
ttacaaaacaaaactgcagttgactggggttggcaaggtctgattgctcagggatgccac
tccagcatcctcattatcgacccaaagaccgctcagacgattcaggtcttggagagacac
aaagccaatgttgtcaaggtgaaatggtccagagagaactaccaccacaacctgagctca
ccttactctctgcggctggcctcggctgacgctgcaggcaaaatcattgtgtgggacgtg
gtgagcggtatggcgcactgtgagattcaggagcactccaaacccattcaggacatggat
tggctgtggaatcaggatgcatcacatgaccttattttggctgtgcaccctcccaactac
atagtgttgtggaacggagacacggggaccaagctgtggaagaagagctatgctgagaac
atcttgtccttctcttttgacccgtttgacccctccaatttagccttgctgaccagtgag
ggaatcgttttcatcacagacttctcaccgtccaagcccccaggcagcagcggtaagaag
gtttacattgccagcccacactccagccctgctcacagcaaacccgctgccacacatccc
actggggctaagaaagctctcaacaaggtcaaagtgctcatcaccaacgagaaacccatg
gctgaggcagtaaccctaaatgactgtctccagttgtcctacctaccctcaaagaagagt
catatgttgctgctgtaccctagagagatcctcatcctagacctggagctcagccagacg
gtgggggtggtggccatcgagcgttccggcgtgcccttcatgcaggtgattccctgcgca
cagagggatgctctctactgcctgcacgacaatggctgcgtcacactgcgcgtgtgtcga
tccactgcactctcggcggaggaaacagcagtgccgtctgagacggagcagggagtgcag
gagctgtcgtacgatctgcgctctcagtgtgatgcaatccgtgtgactaagacagtgcgg
ccgtaccgggcggtgatctgccctgtcaacgagaacagagccgcactggtggtgagcgat
gggcgcatcatgctctgggagctcaaagctcacactggcaaagtatcatctaacctcagc
tcaggcttgtccccgctctactctccagtaaatttttgtgggactccattgggtcagaac
cagaaacgaatcccagacctctccctcaactcaatgatcggtcccactctgatctcgggt
gttgatcctcctgtatccatggtggggcagcaggaggtgcagctgaagttcctactgaca
gggctgttgtctggtttgcccctgccacccttctccttgcgcatgtgtcctcctttaacc
actaaaaatatccagcactaccagccgctgctggccgtgggttcgagtaatggctcggtg
ctggtgtataacctgacgagtggactcctacacaaagagctcagcgtgcattcatgtgaa
gtcagagggatcgagtgggttagtctgacaagtttcctgtcctttgccacctctgctccc
aacaacctgggccttgtgaggaatgagcttcagcatgtggatttgcgtacaggcaggtgc
tttgcattccggggtgagcgcggcaatgatgagccagccatcgaaatgattaaagtgtcg
catctaaagcagtatctggtggtggtgttcagagacaaacccctggaactctgggatgtg
cgcacaggaaccttgctgcgtgagatggccaagaacttcccctcagttactgcattggag
tggtctccctcgcacaacctgagaagtctgaagaagaaacagatggcagcccgggaggcc
atggccagacagaccacgctggcggacgctgagcagagcagtgttgagtcgtctgtcatc
agtctgttgcaggatgcagagagcaaggcagagaccagtcagggcatctcagcccgcgag
cactttgtgttcactgacacagacggccaggtcttccatatcaccgtggagggaaacact
gtaaaggaaggagcacgcatccctcctgatgggagcatgggcagcatcgcctgcatcgca
tggaagggagacacgctagtactaggagatgtggatggaaatctgaatttctgggatctg
aaggcccgtctgtcccgtggtattcccacacaccgaggatgggtaaagaagatccgtttc
gctcctggaaagggcaatcaaaagctactggtgatgtacactgacggagctgaggtgtgg
gacaccaaagaggtgcagatggtgagcagtatcagagtgggccggaatgtgagttaccgt
atcctggacatcgattggtgtacatcagataaggtggttctggcctcagatgatggctgt
gtccgcgtgctggagatggccatgaaatctgccagctacaggatggatgagcaagaccta
acagatccggtgtggtgtccgtacctactgcttccgcgtgctgctctcaccctgaaggcc
ttcctcctgctgcagccctggtctggcaccttcaccatggacatcactcaagtggactac
caagagaaggacgaaatcaaaggcttggtgcaagaacagctgaactccttgtccaatgat
gtcaaaagtgtactccaggacccagagctgaatctgcttcaacgctgcctcctagtgtcc
cggctgtttggtgatgagtcagacctgcagttttggaatgtggcggcgcattacatcaag
tctttttcccaggcacggcagctgagtgtgcccactcctgatgggcagacacagccagag
tgctcccagagtaccactcagtgccatctggacatctgccacgatattctgtgtgaaagc
tccttctttcagagattccagttagaaagggttcatctgcaggaggtgaagaggtccagc
tatgaacacacaaaaaaatgtgcagaccagctgcttctccttggacagacggaccgggcg
gtgcagctgctgttggagacgagtgccgaaaacccgagctactactgcgattctcttaaa
gcctgccttgtgacaactattccctcctctggaccttctcagagcaccattaaactagta
gccaccaatatgatcgccagcggaaagctagcagagggcgtgcagttgctgtgtttgatt
gacaaggcagcagacgcctgtcgttatctgcagacatacggcgagtggaaccgcgccgcc
tggctggcaaaggtgcgtctgaatccgactgaagcctcggacgtgctgaagcgctgggct
gagtacctctgttcttctcaggtcaatcagaagtccaaagcgatcctggtgcttctctca
ctgggctgcttccagaaagtgggcgagatgctccacagtatgaggtattttgaccgggcg
gcgctcttcattgaagcctgtctgaaatacggcgtaatggaggccaacgacaccactaat
aagttaataggggcagcgttttcctcttacgctgggcttcttcgctcagtgggattgaga
gagggagcagcgctgtgggcctcgaaggctggaggagcaggagaggagctcctggaggag
ttgttccagaacgaagggtccggatcagatgtctcacctggggaggaggagaagaagagc
agcctgggcgtcactgaatcactctag
DBGET
integrated database retrieval system
