Ictalurus punctatus (channel catfish): 108263587
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Entry
108263587 CDS
T04658
Name
(RefSeq) muscular LMNA-interacting protein isoform X1
KO
K27832
muscular LMNA-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108263587
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108263587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MLIP
Motif
Other DBs
NCBI-GeneID:
108263587
NCBI-ProteinID:
XP_017320049
Ensembl:
ENSIPUG00000015907
UniProt:
A0A2D0QP13
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Position
3:complement(6828633..6868313)
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AA seq
856 aa
AA seq
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MSKQTLNTSNSMALEQPRGAFGKVSIVFATKLKSFTFLPVLKKLPTENRVKSVWKKGSSK
RNEALGDHEAAEGKTFDEGTFNAKVVYVSDMEPQEMTKHSETQQKSTTKSAIAPLPIPAV
AHGEISCTSPKTHPGTLDTVDNKHSRTPQLGCHNTEAEVSSGLILDSESQREEEVLSPVS
SVDIFTSPFSSKESILSEGWEQETGWSALQMLSPSGSVSPCSSVRSGAFTPSVLRIKCHK
LAPGSCLMQMPLTSCQTLGCNRHITSPCPLSTRARHRPPPTQLSLLTAILRKGRLPVLSS
ALQRPYSPCWPISPVNMSSCLACSAASNVAPMVGLRAKSCLSKGKNCTELSCKARPKPPG
LISKTEPVSPKDQNKGRRSLTAVETSDAIDSNTNAARSRIISMPEGISSLTMSSYSPSEP
PPAHLSKQSHKDIHVSTDPSLMLGSPSSRLMSLSPESNLDQGNGHKSNDTSPIVRKTKPC
QASSSDLKLVQMAHERSPTPDHKPIQQSQDILASAVPKYIDVRPGSHLRNYRKISQELEK
IHSVSPVFQHSPSPRVAGLTHLADTPSISPVLLSPRPGSCTSTSGCNTLSSSPAVPYHHL
SPSPSYSLCSSPTPSQRDSTPDCIDRGSKKPYKIKSTYKALAAIPTNTLLLEQQAIDDEV
DKNNAPLDPSDSFAWEDPHSQMCSPAQLRQQSKELYQVIDEVLKDTNQARPSSSTNKLTA
KSVASEATRKLTPSPRSLGRETKYATFHLQPPAHAEKTLTKPGVIRPAIVMSRLDDDKEK
SCFSNTYQKQQDRFSTDHQNNIASSTLSTKDEPHGRGDLEGEKESSEVREKCMSSSILVK
NQAREYSTPSPRGMSL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacaaacgctcaacacaagcaatagcatggctttggagcagccacgtggggcc
tttggaaaggtctccattgtctttgcaaccaagctcaagtcatttaccttcctgccagtt
ctgaaaaagctgcctacagaaaacagggttaaatcagtgtggaagaaagggtcaagtaaa
cggaatgaggctttgggagaccatgaggctgcagaagggaaaacatttgatgaaggtact
ttcaatgccaaagttgtctacgttagtgacatggagccccaagagatgaccaagcactct
gaaactcagcagaaatctactaccaagtcagctattgccccattgcctatcccagctgtg
gctcatggtgaaataagctgcacaagcccaaagactcaccctggcaccctggacacagtt
gataataaacattcaaggaccccccagctagggtgtcacaacactgaagctgaggtcagc
tcagggctgattttagacagtgagtctcagagagaggaggaggtcctgagcccagtcagc
tctgtggacatttttacatctcctttctcttctaaagagtccatcctctctgagggctgg
gagcaggaaacaggctggtctgcgctccaaatgctatctcccagtggttctgtctccccc
tgttcatctgtgaggtcaggggcttttaccccatcagtactgagaatcaaatgccacaaa
cttgccccaggctcctgcctaatgcagatgccgcttacctcctgccagacacttggttgc
aacagacatatcacctcaccatgccccttgtccacccgtgcccgacacaggcccccaccc
acacaactgtcactgttaacggccatcttgaggaagggccgtttaccagtcctttcttct
gccttgcagaggccctactctccttgttggcccattagcccagtcaacatgtcctcctgt
ttggcctgttcggcggcttcaaatgtagctcctatggtgggcttacgagcaaagtcatgt
ttgtctaaaggcaaaaattgtacagagctcagttgcaaagcacggccaaagccaccaggt
ttaatttctaagacagagcctgtgtcacccaaggaccagaacaagggaaggcgctcatta
acagcagtagaaacatcagatgcaattgactctaacacaaatgcagccagaagtaggatt
atttcgatgccagaaggaataagttctttgaccatgtcaagttactctccttctgagcct
cctccagcacatttatccaaacagtcccataaagatattcatgtatccacagatcccagc
ttgatgcttggttcaccttcctctagactaatgtctttatctcctgaatccaatttagac
caaggaaatggacacaaatcaaatgacacatctcctattgtaagaaaaacaaaaccttgt
caggcatcatcctctgatttgaaacttgtgcagatggcacatgaacgttctcctacccct
gatcacaaacccattcaacagtctcaagacatcttagcttcagcagtcccaaagtacata
gatgtcagaccaggctcacatttgcgaaattacaggaaaatctctcaagagctagagaaa
attcattcagtatccccagtttttcaacattctccttccccaagggttgctggcctcacc
catcttgctgacacaccttctatttcacctgtcctcctctcaccgaggccaggctcctgc
acttctacatcaggctgcaacacattgtcttcatctccagcagtcccctatcatcatctc
tccccttctccctcttactcactctgttcctcacctactccatcccaaagggacagtact
ccagactgcatagacaggggtagcaaaaagccatacaagatcaagtccacctacaaggct
cttgctgctattccaacaaatactctccttctggaacagcaggcaattgatgatgaggtt
gataagaataatgctcctctggaccctagtgacagttttgcatgggaggaccctcattct
cagatgtgcagccctgcccagctccgacagcagtccaaagagctttatcaagtgattgat
gaagtattaaaggacacaaaccaagcaagaccctcaagttctactaacaaactcactgca
aagtctgtggcatctgaagcaacaaggaaactaacaccatcgccaagatctttaggacga
gaaacaaaatatgctacttttcatctccaaccccctgcacatgctgaaaaaacactgaca
aagcctggggttataagaccagccatagttatgtcaagattagatgatgacaaagagaaa
agctgtttttcaaatacatatcaaaaacaacaagatagattctccactgaccaccagaac
aatattgccagcagtacgttgtccacaaaggatgagcctcatggaagaggagatttggaa
ggggagaaggagtcctctgaagtacgtgagaagtgtatgtcaagctcaatactcgtgaag
aatcaggccagggaatacagcactccatcgccaagaggcatgtctctataa
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