Ictalurus punctatus (channel catfish): 108263602
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Entry
108263602 CDS
T04658
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108263602 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108263602 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108263602 (eef1a1a)
03012 Translation factors [BR:
ipu03012
]
108263602 (eef1a1a)
04131 Membrane trafficking [BR:
ipu04131
]
108263602 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108263602 (eef1a1a)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108263602 (eef1a1a)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108263602 (eef1a1a)
Translation factors [BR:
ipu03012
]
Eukaryotic type
Elongation factors
108263602 (eef1a1a)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108263602 (eef1a1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108263602 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
108263602
NCBI-ProteinID:
XP_017320088
Ensembl:
ENSIPUG00000023399
UniProt:
A0A2D0QNM4
LinkDB
All DBs
Position
3:complement(21375477..21381948)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPETVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSVSGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNITTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAASFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKNLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPTCGKVTKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagctccacatcaacattgtggtcattggccatgttgactctggcaag
tccactactactggtcacctcatttacaagtgtggtggcatcgacaagagaaccatcgag
aagtttgagaaagaggctgctgagatgggtaagggctcctttaagtatgcctgggtgttg
gataagctgaaggcggagcgggagcgtggtatcaccattgacatttccctgtggaaattt
gagaccagcaagtactatgtcacaatcattgatgctcctgggcatagggacttcatcaaa
aacatgattactggcacctcccaggcagactgtgctgtcctgatagtggcagctggcgtt
ggagagtttgaagctggtatttcaaagaacggtcaaaccagagagcatgcactcctggcc
tatacgctgggtgtaaaacagctcatcgtaggtgttaataagatggactccactgagccc
aactacagccagaagcgctatgaggaaattgtaaaggaagtcagtacttacattaaaaag
attggctacaaccctgaaaccgtggcatttgtccccatttctgggtggaacggtgataac
atgttggaggccagccccaatatgacttggtttaagggctggaagatcacccgtaaggat
ggcagtgtatcaggaactactcttctggaggctctcgatgccatccagcccccaactcga
cccactgataaaccactccgtctacctctgcaggatgtctacaagattggaggtattgga
actgtccctgttggtcgtgtggagactggaattctgaagccagggatggtggtgaccttt
gccccagttaatataactactgaggtaaagtctgtggagatgcaccacgaggctctgtct
gaagccctgccaggggacaacgtgggcttcaatgtcaaaaacgtctcagtgaaggatatc
cgccgtgggaatgttgctggggacagcaagaatgatccaccccaggaggcagccagcttc
actgctcaagtgatcatcctgaaccacccagggcaaatcagtgctggttatgctccagtg
ctggactgtcacactgcacatatcgcctgcaagtttgctgagctcaaggagaagattgac
cgccgctctgggaagaaacttgaggataatcccaagaacctcaagtctggggatgctgcc
attgtagacatgatccctgggaaacccatgtgtgtggagagcttctcagagtatccacct
cttgggcgctttgctgtgcgtgacatgcgtcagactgtggcagttggagtgatcaaggga
gtcgagaagaaggctccaacttgtggaaaagtcaccaagtctgctcagaaagcccagaag
gccaaatga
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