Ictalurus punctatus (channel catfish): 108263624
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Entry
108263624 CDS
T04658
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108263624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108263624
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108263624
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
DUF87
AAA_29
AAA_21
AAA
AAA_25
RsgA_GTPase
AAA_33
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
108263624
NCBI-ProteinID:
XP_017320129
Ensembl:
ENSIPUG00000020341
UniProt:
A0A2D0QP95
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All DBs
Position
3:complement(23293498..23304994)
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AA seq
704 aa
AA seq
DB search
MSGVIMLQMSRFATRKLLQQWNINCKNPVRLYQLSGLTLMRSQRKLVCKNVFEASLFTHV
RLGVTSGPRCVWTNFRASTPFTFYSTSTHSRQAAEHAGSEVKTNDKPGQVSTNDFKKLLQ
LAHPERWRLSAAVSFLVVSSAVTMSAPFFLGKVIDTVYSNSSEEFTSSLTSLCIMLAGVF
LCGGAANAARVYLIQVSGQQIVRNLRESLFSSILRQEVGFFDKTRTGELINRLSSDTAIV
GSALTDNVSDGLRSIAQAGAGVSMMFYVSPSLATFVLMIVPPMAGLAVIYGRYVRSISKQ
TQDALAQAMQLAEERISNLRTVRAFGKELTEVQTYAEKVDYVLRLAKKEALFTAGFFGVT
GLSGNMIILSVLYKGGLLMGSEHMTVGELSSFLMYAFWVGISIAGLSSFYSELMKGFGAG
TRLWELMERKPEFPLNEGVVLRPEQLKGALEFHNVSFAYPTRKDVLIFQNLSLTVPAGSV
MAVVGSSGSGKSTLVSLLLRLYDPDSGMVTIDGHDIRNLNAYWLRSRIGTVSQEPVLFSC
SIAENIAYGASDPSQVTTQDILRAAQIANAHDFINGFPKGFDTVVGEKGVLLSGGQKQRI
AIARALLKNPKILLLDEATSALDTENEFLVQEALERLMQDRTVLVIAHRLSTIQNADAVA
VLDQQHVVECGSHAQLLTNQDGLFRKLMERQALLHADPKLALAK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagtaataatgttgcaaatgtcgagattcgctaccaggaaactgttacagcag
tggaatatcaactgcaaaaacccagtaagactttaccagctgtctggtctgactttgatg
agatcccagagaaaactggtctgtaaaaatgtatttgaagcatccctttttacccatgtc
cgacttggagtgacttcaggtccacgttgtgtttggacaaacttcagggcctccactcca
ttcactttttacagcacgtcgacacactccaggcaagcagcagagcatgcgggcagtgaa
gtcaagaccaatgacaaacctgggcaggtttccacaaatgacttcaaaaagttattgcaa
ctcgctcatccagagcgctggaggctgtcagctgccgtgagcttcctggttgtctccagt
gctgtcaccatgtctgctccatttttcctgggtaaagtgatcgacactgtctactcaaac
tcatctgaagaatttacttcctccctcacctccctgtgcatcatgctggcaggggtattc
ctgtgtggtggcgctgccaacgctgcacgtgtataccttattcaggtctcagggcagcag
attgtgagaaacttacgggaatcccttttttcctcaattttgaggcaggaggtgggattc
tttgataagacccgcactggtgagctcattaaccgcctttcatcagacactgctatagtt
ggaagtgcgctcactgacaacgtgtctgatggtctacggtcaattgctcaggctggagct
ggagtcagcatgatgttctatgtgtcacccagtcttgccacctttgtcctaatgattgta
ccacctatggcaggcctggcagtcatctatggaagatatgtgcgctccatatctaaacaa
acacaggatgctctggcacaggccatgcagctggcagaagagaggatcagtaacttacgg
acagttagggcatttggcaaagagctgacagaagtgcagacctatgcagaaaaggtggat
tacgtcctccgactggctaaaaaggaagctctgtttactgctggtttttttggagtgacg
ggcctgagtggcaacatgatcatcctgagtgtgctgtataaaggtgggctgctgatgggt
agtgagcacatgaccgtaggagagctttcctcgttcctgatgtatgccttctgggtgggc
atcagcattgctggcctgagctcattctattcagagctgatgaaggggtttggagctggt
acacgcctgtgggaactgatggagcggaagcctgaatttcctctcaatgagggagttgtg
ttgagaccagagcagctgaagggagctctcgagttccataatgtgtcatttgcttacccg
acaaggaaggatgtcctcattttccagaacctgagtctgactgtgccagctggttcagtg
atggcagtggtggggtcaagtggctctggaaagtctactcttgtgtcccttctgctccgt
ctgtatgatccagattcaggtatggtaactattgatggccatgacatccggaatttgaat
gcttattggctgcggagtcgtattggaactgtcagccaggagccagtcctcttctcctgc
tccatagctgagaacattgcatacggagcatcagatcccagtcaggtcaccacacaggac
atcctacgagcagcacagatagctaatgctcatgacttcattaatggatttcccaaaggc
tttgacactgttgttggcgagaaaggagtactgctatcaggtggacagaaacaaagaatt
gctatagcaagggccttgctaaagaacccgaaaatactgttattggacgaagccacaagt
gctctggatacagagaatgagttcctggtgcaagaggccctggagcgcttaatgcaggac
cgcactgtgcttgtcatcgctcaccgtctctccaccatccagaacgcagatgctgtggct
gtactggaccagcagcatgtagtggagtgtggcagtcatgcccagcttctcaccaaccaa
gacggtcttttccgcaagctcatggagagacaggccttattacatgctgatccgaagctg
gctctcgccaaatag
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