Ictalurus punctatus (channel catfish): 108263630
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Entry
108263630 CDS
T04658
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108263630
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
C1-set
ig
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
108263630
NCBI-ProteinID:
XP_017320142
Ensembl:
ENSIPUG00000002618
UniProt:
A0A2D0QP12
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Position
3:complement(34124842..34132743)
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AA seq
439 aa
AA seq
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MRDISTIYKLSVITFALLGGACSSRCSVLECWFVQERPGGGGFSGMSQEKSVLYIRTAPD
SEKLERKPPSDVSPSRIYYVSDPASTFCSSALHPPEGTVHKPQCEINPFTPQASMVKWAA
PLTTSGQSPVYLSADWFSVAAQGLNGELTLANVMRASTGSKEPSVILSVSSTTSTVRTRL
GEPVLLDCGFWVDPSSPLHGSGFAVEWRYQFRGEGRLVLAYDGMNDRFAEMSETDAELDI
VGLDKTRNASLVLKEAQVRHVGTYICTVYLPHLLAQVALDLEVVEPPSVAVYPSSLPLSV
PGQVVTVHCEASGFFPLSLDLDWEFTDAEGKKLSLGQGSVTGHRQAKDGTFSQSSRLELD
SFKLGLGRGGEVSCIAKHKGGSRRATVTLNVIGVSAPSIEDSMAMVAVALILYGVIKIFF
WTFSSNDTSNGEPSDKKEK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagggatatttccaccatctataaactctctgtgattacttttgcgctgctgggcggt
gcgtgcagttcaagatgctcggtgttggagtgctggtttgttcaggagaggccgggtggt
ggaggtttctcaggaatgagccaggagaaatccgtgctgtacatcagaaccgcccccgat
agcgagaagcttgaacggaaacctccgtcagacgtcagtccgtccagaatttactacgtg
tctgatcctgcgtccactttctgcagctctgccctccatccaccagagggcactgtgcac
aaaccgcagtgtgagataaaccctttcacccctcaagcctccatggtgaaatgggccgcc
cctctcaccacctcgggacaaagccccgtctacctgagcgccgactggttttctgtagca
gcacaaggtcttaacggagaactgacgctggcgaatgtgatgcgggcgtcgactggttct
aaagagccgagcgtaatcctcagcgtctccagtacaacctccacagtccgcaccagactg
ggcgaaccggtcctcctagactgtgggttctgggtcgacccgtcttcacctctgcacggt
tctggctttgctgtggagtggcgctaccagttccggggtgaaggcaggctggtcttggcc
tacgacggaatgaacgatcgcttcgctgagatgtcagagacagacgctgagttggacatc
gtgggtcttgacaagacacgaaacgcatcgctggttctgaaagaggcccaagtgagacat
gttgggacttacatctgcaccgtttacctgcctcaccttctggctcaggtggccttagac
ctggaggtagtggagcctccatctgtggcggtctacccctcctctctgccgctgtctgtc
ccggggcaggtggtgacggtccactgcgaggcttccggtttctttcccctgtctctggac
ctggactgggaattcactgacgctgaggggaagaagctctcgctcggtcagggtagcgtg
acgggccacaggcaggccaaagacgggaccttcagccagagctctcgcttagagctcgac
tcgtttaaactgggactcgggcgaggcggagaggtcagctgcatcgccaaacacaaggga
ggatctcgacgggccactgtgactctgaatgtcatcggtgtcagtgctccgtctattgag
gactccatggccatggtcgctgtggctctcatactttacggtgtaataaagatctttttc
tggactttcagctctaacgacacgagcaatggagaacccagcgataagaaggaaaaataa
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