Ictalurus punctatus (channel catfish): 108263718
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Entry
108263718 CDS
T04658
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome biogenesis
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108263718
04142 Lysosome biogenesis
108263718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108263718
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
108263718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
108263718
NCBI-ProteinID:
XP_017320274
Ensembl:
ENSIPUG00000015731
UniProt:
W5UCC5
A0A2D0QPN3
LinkDB
All DBs
Position
3:complement(26740614..26753586)
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AA seq
327 aa
AA seq
DB search
MSFLGGLFGPVCEIDVVLNDAESRKTAELKTEDGKVEKHYLFYDGESVSGKVNLNVKQTG
KRLEHQGIRIEFVGQIELFSDKSNTHEFVNLVKELALPGELTQNRSYDFEFMQVEKPYES
YVGANVRLRYFLKVTIVRRLSDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEMTGIGPSTTTETETVAKYEIMDGAP
VKGESIPIRLFLAGYDLTATMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIVLWRKAPE
KLRKRNFHQRYESPESRPSLSAEQPEM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctcggtggtctgtttggtcctgtgtgtgagattgatgtcgtactcaatgat
gctgagagcagaaaaacagcagagctgaagacagaagatgggaaagtggagaaacattat
ttattttatgatggagagtcagtttccggaaaggtaaacctcaacgtaaaacaaactggt
aaacgacttgaacatcaggggattcggatagagtttgtcggacagattgaactgttcagt
gataaaagcaacacacacgagtttgtgaacctggtgaaggagcttgctcttccaggagag
ctgacccagaatcgcagctatgactttgagttcatgcaagtggagaagccatacgagtcc
tacgttggagctaatgtgcgactgaggtatttcctcaaagtaaccatagtgaggaggctt
tctgatttggtcaaggagtatgacctcattgtccatcagcttgctacctacccagatgtc
aacaattccatcaagatggaagtgggcattgaggactgcctacacatagagtttgagtac
aacaagtccaaataccacctaaaagatgtaattgtgggtaaaatctactttctactggtt
cggattaaaatccaacacatggagcttcagctaatcaagaaagaaatgaccggcattggg
ccgagcacaactacagagacagaaactgtggctaaatatgagattatggatggagcacca
gtgaagggtgagtccattcccatacgcctcttcctggctggctatgacctcacagctaca
atgagagatgtaaacaagaagttctctgtgaggtacttcctaaatctggtgctggtggat
gaagaggacaggagatacttcaaacagcaggagattgttttgtggcgaaaagcccctgag
aagctcagaaaacgcaacttccaccagcgttacgagtccccggagtcacgaccgagcctc
tctgctgaacagcctgaaatgtga
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