Ictalurus punctatus (channel catfish): 108263741
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Entry
108263741 CDS
T04658
Name
(RefSeq) core histone macro-H2A.2 isoform X1
KO
K11251
histone H2A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03082
ATP-dependent chromatin remodeling
ipu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108263741
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108263741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108263741
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108263741
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
108263741
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108263741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
108263741
NCBI-ProteinID:
XP_017320324
Ensembl:
ENSIPUG00000002757
UniProt:
W5ULE6
LinkDB
All DBs
Position
3:complement(17467358..17481786)
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AA seq
367 aa
AA seq
DB search
MSARGGKKKTTKLSRSTRAGVIFPVGRMMRYLRTGTHKYRIGMGAPVYMAAVIEYLAAEI
LELAGNAARDNKKGRITPRHIKLAVANDEELNQLLRGVTISNGGVLPRIHPELLSKKRGG
RVKVDSQMTAPEKTEKEVKSSKRSSKKRGKPGRKPRKSADNDKDGTNSTMEDGPGEGFTV
LAAKSLFLGQKLSLAESDISKIGAIKVEGIINPTNAEIDLKDGIGNALEKAGGKDFLDAV
KELRKTQGPLEVASVAVSQASGMAARFIIHCNVPQWGSDKCEDQLEKTVKNCLSAAEEKK
LKSVAFPSLPTGRNGFPKQTAAQLILKAISNHFVSATTSSLKNIYFVMFDSESIGIYLQE
MTKMDVK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccagaggaggaaaaaagaagaccaccaagctgtcacgctcaacccgggctggc
gttatctttcctgtagggaggatgatgaggtacttacgcacagggactcataagtaccgc
atcggtatgggagctcctgtctacatggcagctgtcattgagtacctggcagctgaaatt
ttggaactagctggtaatgcagccagagacaacaagaaaggacgaatcactccacggcac
atcaagttagcagtggctaatgatgaagagcttaaccagctactcagaggggttacaata
tcaaacggtggcgtcttgccccgtatccaccctgagctgctctccaagaaaagaggaggg
agagtgaaggtagactcacagatgacggcaccagagaaaacagagaaagaggtcaagagc
agcaagagatcctccaaaaagagagggaaaccaggccgtaagccaaggaagagtgcagat
aatgacaaagatggaaccaacagcacaatggaggatggaccaggagaaggattcactgtt
ctcgcagcaaagagtttgttccttggacaaaagctgtctcttgcagagagtgacatcagc
aaaattggagccatcaaagttgagggaattattaatcccacaaatgcagagattgatctg
aaggatggaattggtaatgcactggagaaagctggagggaaagatttcctggatgctgta
aaagaactgcggaagacgcaaggccccttggaggttgcgtcagttgcagttagccaggcc
agtggaatggcagcacgtttcatcatccactgcaatgtccctcagtggggctctgataag
tgtgaggatcagctggagaagacggtgaagaactgcctgtctgctgcagaggagaagaag
ctcaaatctgtggcattcccttctctacccactggaagaaacggtttcccaaagcaaact
gcagcccagctgatactgaaggccatttcaaaccattttgtttcagcaacgacatcctca
ctgaagaacatttactttgtgatgtttgacagtgagagcattggaatttatctgcaggaa
atgaccaagatggatgtcaagtga
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