KEGG   Ictalurus punctatus (channel catfish): 108263746
Entry
108263746         CDS       T04658                                 
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108263746
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ipu04990]
    108263746
Domain-containing proteins not elsewhere classified [BR:ipu04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   108263746
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 108263746
NCBI-ProteinID: XP_017320335
Ensembl: ENSIPUG00000021620
UniProt: W5U9L0
LinkDB
Position
3:22317915..22325075
AA seq 322 aa
MPQRIVMQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQASLCIGDIIIAIDGEPTEGM
THLEAQNKIKGCVEEMVLSIDRSELKTWSPLVSEDGKTHPYKMSLASESQEVKHIGSAHN
RSALPFNSPAGSKVVTSQYNNPAVLYSSDNIKNFNSAVGGAKTIMTSSEPSNNPDLSKPV
QPKPSIAVDSEVYKMLNENQESCEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKI
ASSLGSTEKLSICDKCGSAIVGMFVKLRDKYRHPECYVCTDCGTNLKQKGHFFVEDKIYC
EKHARERVTPPEGYDVVTVFPK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgccccagcggattgtcatgcagggtcctggaccttggggatttagactggtcggtggt
aaagatttcgaacagcctctgactatttcacgggtaaccccaggaagtaaagcagcccag
gccagcctctgtattggcgacattattattgccattgatggtgagccgacggagggaatg
actcacttggaagcccagaataagatcaagggttgtgtcgaagaaatggtcctctctata
gacagatcagaattgaaaacgtggtctccccttgtctctgaagatgggaagacacatcca
tacaagatgagtctggcctcagaatcacaggaagtgaaacacataggttctgctcacaac
aggagtgctcttccgttcaattcgccagctggttccaaggtggttacaagccagtataat
aatccagctgtcttgtactcttctgataacatcaagaactttaacagtgctgttggtggt
gccaagaccattatgacatccagcgaaccaagtaataatccagatctctccaaaccagtc
cagccaaaaccatcaattgctgttgactccgaagtctataaaatgctgaatgagaaccaa
gagtcatgtgagcctccacgtcagtctgcatcattcaaagtcctgcaggaaatccttgag
actggtgattctgacaagccatctgggtttagaagtgtgaaagcacccactacaaaaatt
gcttcttctctaggcagtactgagaaactctccatctgtgacaaatgtggctcagcgatt
gtgggcatgtttgtcaaactgcgagataagtaccgccaccctgagtgctatgtctgcact
gactgcggaacaaacctgaaacaaaaaggacactttttcgtcgaggacaagatttactgt
gaaaagcatgcacgtgaacgagtgacccctcctgagggttatgatgtcgtcactgtcttc
ccaaaatag

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