Ictalurus punctatus (channel catfish): 108263753
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Entry
108263753 CDS
T04658
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
ipu
Ictalurus punctatus (channel catfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
108263753
NCBI-ProteinID:
XP_017320351
Ensembl:
ENSIPUG00000009661
UniProt:
A0A2D0QPL7
LinkDB
All DBs
Position
3:13099868..13247546
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AA seq
979 aa
AA seq
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MLRARRAVTAKVYKEPTTDDDPIDSPVSEEEPEEWLPEEKTRGRGRRKKGEPTDMKPVTK
RAAKPKESKPKESKPREPKPKEPKPKAERKHRAPRVLKVKNDVDKEKGEDNNNNADFHQD
ESLPQVRVKEERQSISMDTVFSTAVIAHEEPSSSTQLPVVKKEEPEDDFNFDEPVQKKRK
TTSAPQGKPVNIKSANTLRDELQMNWDPVQVLAEKTGVEQWVCGNIAQLLREENTIPFMV
RYRKELINHMDADSVRDVQLALEDLCSVAKKSQSITQTLKKEGCLTFELEKTLKDCKSAD
ELDHVYAPYKKGSKLSKARRAKQLGLEAPALALLQSPQTLDLRSWIQPNTEGLYTLEEVT
TGVEQILADMIAKDGETLTYIRSLCDRSDVTIQSTVSKTALKEQQQADQKSKPKDISKFS
LYSSFRCSVQRIQHHQTLAINRGENLKILSVKVNIPDWVKADFCRWCVNARWRPQGFARP
ELMKILNSAVEDSYKRLLMPLLSRGYRTKMTTSAEKESVAMFVRNLRQRLLVCPVRGRVL
MGVDPGFRHGCKLAILSPTSQILHTDVVYLHSSGRNREADKLRHFMLKYSCQTVVIGNGT
ACRETESFFADLIKSGFFKPLDVSYCITNEAGASIYSVSPEAVKEMPDLDPNLRSAVSIG
RRVQDPLAELVKIDPKHIGIGTYQHDVSQTLLRTALDGVVQECVSFVGVDINICSETLMR
HVAGLNAGRARSVVEWREKNGPFFNREQLKLVKGLGPKSFQQSAGFIRINPETAHSFGSG
ENSSSTTAEKSTAKKSKGICNKPNPLDQTCIHPESYSLAMRFLSQIGGSLDQLGSTELQQ
QVKSTVMSSSLECLAQTLNTCPETLQLIVEGLTQPPGFDIRQDFEQAVFKRSIVSMNDLH
EGMVLTGHVENTALFGAFVDIGVGRSGLIPMRYITQDKLPADKRRRSLAIGPGERVEVRV
INVDLQRNRITLDLIRVLR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagctcggagagcagtaacggcaaaagtgtataaggaaccgactacagacgat
gaccccatagacagcccggtgagtgaggaggaaccagaggaatggctgccagaggagaag
accagaggaagagggaggaggaagaaaggagaaccaactgacatgaaaccggtcactaaa
cgagcagccaaacctaaagagtcgaaacctaaagagtcgaaacccagagagcccaaacct
aaagagcccaaaccaaaggctgagagaaagcatagagcaccaagggtccttaaagtaaag
aatgatgtcgataaagagaaaggagaagacaacaacaacaatgcagattttcatcaggat
gaatcactgccacaagtacgggttaaggaagagaggcagtctatcagcatggacaccgtg
ttcagtactgctgttattgcacatgaagagccatcatccagtacacagctccctgtggtg
aaaaaggaagagcctgaggatgactttaacttcgatgagccagtgcagaaaaagcggaag
accacaagtgcgcctcagggcaaaccagtcaacataaagtctgctaatactttacgagat
gaactgcagatgaactgggaccccgttcaggttttagctgagaagactggagtggagcag
tgggtctgtggtaacatcgctcagctcctgcgggaggagaacaccatcccgttcatggtg
cgctacaggaaagagctgatcaaccacatggatgcagactcagtgagggatgtgcagctt
gctttggaggacctctgctcagtggcaaagaagtctcagtcaatcacccaaaccctgaag
aaggagggatgtttgacctttgaacttgagaaaactctgaaggactgcaaaagtgctgat
gaactggaccatgtgtatgcaccatataagaagggcagtaagttgtcaaaggcgaggcga
gcgaagcagctaggtctagaggctccagctctggctcttctgcagtcaccccaaacactt
gacctgcgctcatggatccagcccaacactgaaggtttgtacactctcgaagaggttacc
acaggtgttgagcaaattctagctgacatgattgctaaagacggcgagacgctgacctac
atccgatcactatgtgataggagtgacgtgacaatccagtccacagtgtctaaaacggct
cttaaagagcagcagcaggcagatcagaagagcaagcctaaagacatttcaaaattcagc
ctgtacagttcattccgttgtagtgtgcagcgaatccagcaccaccagacgctggccatt
aaccgaggggagaatctgaagattctgtcagtgaaggttaacatccccgactgggtgaag
gctgacttctgtaggtggtgtgtcaacgccaggtggaggccacaagggtttgcgcgtcca
gagttgatgaaaattttaaatagtgctgtagaggattcctacaagagacttctaatgccc
ttgctcagcagaggctacaggactaagatgaccaccagtgcggagaaggaatccgttgcc
atgtttgtgcgtaatctccggcagcggctgttggtgtgccctgtgcgtgggcgtgtcctc
atgggtgtagatcctggatttcgccatggctgcaaactggcaatcctctcacccaccagt
cagatcctgcacacagacgtggtgtacctgcatagctcaggcaggaatagagaggctgac
aaactgcgccacttcatgcttaaatatagctgccagactgttgtcataggaaatggcaca
gcatgcagagagacggagtctttctttgctgatctcatcaaaagtggctttttcaaacct
ttggatgtgtcctactgtatcactaatgaagctggagcatcgatctacagtgtcagtcca
gaggcagtaaaagaaatgccagacctggatccaaacctgaggagtgcagtgtcgattgga
agacgagttcaggatcctttggctgaactggtcaagattgatcctaaacacatcggcatt
ggtacttaccagcacgacgtgtcgcagaccttgttgaggacggcactggacggtgtggtg
caggagtgtgtgagcttcgtgggagtggacatcaacatctgctccgagacgttgatgaga
catgttgcaggtctgaatgcaggccgggcacgaagcgtagtggagtggagggaaaagaat
gggccttttttcaaccgagaacaactgaagctggtcaaaggccttggcccaaagagcttc
cagcaatctgccggcttcatccgcatcaacccagagaccgcacacagctttggctcaggt
gaaaactcaagctctacaactgccgagaagtcaacagctaagaagagcaaagggatctgc
aacaaacctaatcctctggaccaaacgtgcatccatcctgagtcatacagccttgccatg
aggttcttgtctcagattggtggtagtttggatcaactgggtagcacagagctccagcag
caagttaagagcacagttatgagcagtagtctggagtgtttggcccagactctcaacacc
tgccctgaaactttgcagctcattgtggaaggcctcactcaaccacctggctttgacatc
cgtcaggactttgagcaagcagtgtttaagcgaagtattgtgtccatgaatgatctccat
gagggcatggttctaacagggcatgtggaaaacactgctttatttggggcgttcgtggac
ataggagtgggccgatcgggcctcatcccaatgcgctacatcactcaagataaactgcct
gctgacaagaggcgaagaagtctagctataggaccaggagagcgagttgaagttcgggtt
ataaacgtggatcttcagaggaaccggatcaccttggacctaattagggttctccgatag
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