Ictalurus punctatus (channel catfish): 108263785
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Entry
108263785 CDS
T04658
Name
(RefSeq) integrator complex subunit 12
KO
K13149
integrator complex subunit 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108263785
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108263785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
C1_1
Prok-RING_1
zf-PHD-like
SR-25
PHD_4
RH_dom
PHDvar_NSD
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
108263785
NCBI-ProteinID:
XP_017320421
Ensembl:
ENSIPUG00000001904
UniProt:
A0A2D0QPT9
LinkDB
All DBs
Position
3:36493685..36497418
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AA seq
467 aa
AA seq
DB search
MAGAVSLELDPVFLKGLGYLHSKSKDSAEKLKALLDESLSRGSDSAYRTSLKEAELSKVS
VPKLIKQESKLTSSSSSSSSSSSSSSSSSSSSKSSTSEKSKKEAEKRPAEKVRLECGDAG
DPPKKPRLDKTENRSSPIAFQTKDVPIGDFSYSDETNADDFAMEMGLVCVVCRQMTVTSG
NQLVECQECHNLYHQECHKPQVTDKDVNDPRLVWYCARCTRQMKRMAQKTQKPPQKASPT
ITSVTPVVKDPLVKKAELKPKPDTTGSFQAFKRTEVKASSTALVNSSSSASSLPSGSALT
GWAAFTKTSASASSGTKPGLAKPLPSSSSSKPIGLFALGTKAQTGSGNGNNGGNGNTAAP
LKPPPPLTLGKPALSRSGSGENPGKSGSSSPGAIGSTGAGGSNGGTGGSNGGGNGGNGGN
SSSNSNSTNSQKASADGKAPTSQESQLNAMKRLQMVKKKAAQRKLKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctgtaagtttggagctggatcctgttttcctcaagggcttgggataccta
cactccaagagcaaagactctgcggagaagttgaaggctctgctggacgagtccctgtcc
agaggaagtgattcagcgtatcgtacctcactgaaggaagctgagctttccaaagtgtca
gtacccaagctgatcaaacaggaatccaaattgacgtccagctcgtcctcctcctcatcg
tcatcgtcgtcctcttcgtcgtcatcgtccagcagtaaatccagcacctcggagaagagc
aagaaggaagcagagaagagacctgctgagaaggtgaggttggagtgcggagatgcaggc
gatccacccaaaaagccacgtctggataaaacggaaaatcgttcgtcccccatcgccttc
cagactaaagacgttcccataggagatttcagctacagcgacgagaccaacgctgacgac
tttgccatggagatgggattagtgtgtgttgtgtgcagacagatgacggtgacatctggg
aatcagctggtggagtgtcaggagtgtcacaacctgtaccatcaggagtgtcacaaacct
caggtgacggataaagacgtaaacgacccgaggttggtgtggtactgcgcacgctgcaca
cgccagatgaagcgcatggctcagaaaacacaaaagcctcctcagaaagcaagtccgact
ataacgtcggtcactccggtggttaaagacccgctggtgaagaaggcggagctgaaaccc
aaaccagacacgacgggatcttttcaggcctttaagaggaccgaggtcaaggcatcatct
acggcactggtgaactcctccagcagtgcctcgtctctcccctcgggcagcgccctcact
ggctgggctgccttcaccaaaacctccgcttcagcttcctctggaaccaaaccaggcctt
gccaagcccctcccctcttccagcagttcaaagcccattggtctgtttgcattgggcacc
aaagcacaaacaggaagtggaaatgggaacaatggaggtaacgggaacacggcggccccg
ctgaagccgccgccccctctcacactagggaaacctgctctgagtcgttctggcagcggg
gagaaccctggaaaatccggctcctcctcccccggggcgatcggctccactggtgcgggt
ggctcgaacgggggcacgggtggctcaaatggggggggcaatggaggcaacgggggcaac
agcagcagtaatagtaacagcaccaacagtcagaaagcatcagctgacggcaaagcacca
acatcacaggagtctcagctcaacgccatgaagcgcctgcagatggtgaagaagaaagca
gcgcagaggaagctgaagaaataa
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