Ictalurus punctatus (channel catfish): 108263817
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Entry
108263817 CDS
T04658
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X2
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108263817 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108263817 (rab11fip5a)
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108263817 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
108263817
NCBI-ProteinID:
XP_017320462
Ensembl:
ENSIPUG00000006171
UniProt:
A0A2D0QPX9
LinkDB
All DBs
Position
3:complement(15508904..15528118)
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AA seq
1515 aa
AA seq
DB search
MASVNRDEEQRWVPTHVQVLVIRARGLRAKGKHGTSDAYTVVQLGKEKYSTCVMEKSTEP
EWGEECTFELQPGVLEDGGRDAHPAGTGDLTFTVMHRALIGLDVFLGQTVIALDKAFRER
ACMRNEWYKLHSKTGKKEKERGELQLTVQFTRHNLTASMYDLSMKDKPRSAFIRLRERMR
ARKRGGDEESNSAIVPGGYGALARMRSRLPSDGGGEEDYEDDEGGELRRSKMRSYFLHGR
LRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTV
APSPLVSPVRYVFDEECDLSIPVPHSLTTDSDAPILLPSVCVNGNPVETSPLTHQPPSLV
LQHPRPQTETQQESPNTPQTSPPQKGKPTQAQTTQPPEIKPQPSSEFQTLQPKVESKSKS
DLQFPAVGLLQKGSGLSLSLQNLSRRKEEQQGGGPIDGRRWSFDKPGEEEKAAIAAALDN
AGLMADETVVETAMSVSEIEVQGKKKRGLFSHARAEKVESGHAQPAAEGRHRGWFSSKDP
YSKPSPAIYQPEVPASRPRNPTCPLIAVEAGNSKAILVDGASPNLTNSFCRTDASVDSVK
YTQCGDFIGDRLKLNSKIGTQKMTTLPSSYPIEPTNQTPTCGEGNPVVSNKAYALESVCI
ITPACTLMVDALSHSEAEANFIHCGTQKTDLNNSVPLDALESEFDSSLPHNSSIDFSELH
ALACPYPTRSSCTFNKDKVSAVSVCQINVTPNAMSVLSMTPKPSALSSESLNYLGLAEKF
EHETGKCITFKRLTDDDTKGSVEIQKTSLPYCNFDIRETSSIVTSESPSRGCKVPESKSL
SKGQQNFKSDFGIGKGDGDVVLKESAIKERTCLDVHPTTYPLGLSIPLGLSDSVLQGRLT
MEKDVAGNPGCGSLDTSEVCFVGEGFDIENLKVLMDSSSTESSNMSFTKEKLGDSPHNPS
KGRFGLSETLSGTYLVERPNGSRQTLSSALSPGYVLSHSHYESVDSEQYLTCMSQHSSLT
ISQLSPVAYLKSDTFQEAKPKSGSSQEVLPTNYQSQRIVSELQQNQAEISQETLPKNEGI
SQYDPSNPPLSLTFLPKSLEKCDIIEEAITGTVTNESIQKYDPPVDTMNHDLLHERIPDI
LDMMTTMATEECLMLDSHTFMDKDICSTESHQSHHVKCDGALEDLEIITDFGRSTENVCV
CDFVSEPTSSITEDLVMTDLLLENVFVAQHAVTHSVGTSPVVPTVPRETCTNMELCPDSV
KASQISKNTQATTTAASVPQGEYLGSIIHWSTIQTPLPEPSNLDRLTSGHDLLISSPLLE
LSPLASSTPHVAVGNSLPLSSFPMPSAPAKSLPHTVLAAAAALPPVFAASHDYFPQEEHQ
VACHNNSPHPVKPLTPPDEKRSEGRSMLEKIKSTIHPGRGHQGDQEPEKKLLVEGGGSYY
HLNHSELVSLLVQRDAELQQEREEYERHGLLLQKREVELKKMKILIRDLEDYIDTLLVRI
MEQTPALLQVRSKIK
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtaaacagggacgaggagcagcgatgggtgccgacgcacgtgcaggtgctg
gtgatccgcgcccgcgggctccgcgccaagggcaagcacggcacgagcgacgcgtacacc
gtggtgcagctcggcaaggagaagtactccacatgcgtgatggagaaaagcacggagccc
gaatggggcgaggagtgcacattcgagctgcagcctggcgtgctggaggacgggggccgc
gacgcacacccggccggcaccggcgacctcaccttcaccgtcatgcaccgcgcgctcatc
ggccttgacgtgttccttggccagactgtgatcgcgctggacaaggcgttccgtgagcgt
gcgtgcatgagaaacgaatggtacaagcttcattctaaaactggcaaaaaggagaaagaa
agaggggagcttcagctaacggtgcagttcactcgccataacctgacggccagcatgtat
gatctctccatgaaggacaaacctcggtcagccttcatcaggctgcgtgagcgcatgcgt
gcccggaagcgtggtggggatgaagagtccaactcagccattgtgcctgggggttatggt
gcgttggcgcgcatgcggagtcgtctgccaagtgatggtggtggagaggaagactatgag
gatgatgaaggaggggagttgaggaggagtaaaatgaggagttacttcctccacggaagg
ttacggaagtcttcggacacacgttctagcacatctctgggttctgagagcagcgagtca
tcttctagagggggcagccttagcccaactgctggcatcagtgtagtggtctctgacctc
tccaattcacccagcaacagcagcaacctgactgcagacaacagcccagagcacacagta
gccccctcaccactagtctctcctgttagatatgtgtttgatgaggagtgtgaccttagc
atcccagtgcctcattccctgaccactgacagtgatgcccccattctcctgccctctgtc
tgtgtaaatggaaatccagtggagacatctcctcttactcaccaacccccctcactggta
ctacaacatcctaggccacagacagagacccaacaagaatcaccaaacactcctcagact
agcccaccacagaaaggcaaacctactcaggcccaaaccacccagcccccagaaatcaaa
cctcaacccagttcagaatttcagactcttcagcctaaagtggagtctaaatccaagtct
gacctgcagttccctgcagtaggactgctgcagaagggttctggtctctctctatctttg
cagaacctctctcgccgtaaagaggagcagcagggcggagggcctatagacggccgccgc
tggtcttttgacaaaccaggagaggaggagaaggctgccattgctgctgcactggataat
gctgggttgatggccgatgaaaccgtggtggagacggctatgtctgtaagcgagatagaa
gttcaaggcaagaagaagcgaggcttgttctcacatgcacgggctgaaaaagtcgaaagt
ggtcatgcccagccagctgcagagggaagacacagaggctggttcagctctaaggaccca
tacagtaaaccaagcccagccatctatcaacctgaagtgcctgcctccagaccaagaaac
cccacctgtcctctaattgcagttgaagctggaaattcaaaggcaatcctagtggatgga
gcatcacctaatcttacaaattctttttgcagaactgatgcatcagttgactctgtcaaa
tatacacaatgtggtgatttcattggtgatagattgaagctaaactcaaagattggtact
cagaagatgactacccttccttcttcctacccaattgaaccaactaatcaaacacccaca
tgtggtgaaggtaacccagttgtgtccaacaaagcttatgctctagaaagtgtatgtatt
ataaccccagcatgcactttaatggtagatgcactttctcattctgaagctgaagctaat
tttatacactgtggtactcagaagactgacctcaataactccgttcctctggatgctttg
gaatctgaatttgactcctcattgcctcataactcgagcatagatttctctgaactccat
gccctagcatgcccttaccctacacgttcaagctgcacatttaataaggacaaagtcagt
gcagtctcagtctgccaaataaatgttacaccgaatgcaatgtcggtgttgtctatgact
cctaaaccctcagcactcagttctgaatcattaaattatttaggcctggctgaaaagttt
gaacatgaaacaggcaaatgcattactttcaagagactgacagatgatgacactaaaggg
tctgtagaaatccagaagacatctctgccttactgcaactttgatattcgggaaacatct
tccattgtaacatctgaatctccaagcaggggttgtaaagtcccagagtcaaagtccctc
tcaaaaggacaacagaacttcaaatcagattttggtattggaaaaggagatggagacgta
gtattgaaagagtctgccattaaagaaagaacatgcttggatgtccatccgacaacatat
ccattaggattgtccattcccttaggactcagtgactctgtattacaaggaagattgaca
atggagaaagatgttgcaggtaatccaggatgtggatcattagacacaagtgaagtttgt
tttgtaggggaaggttttgatattgagaacttgaaggttcttatggattcttcttctaca
gaatcaagcaacatgtcatttacaaaggagaaactcggtgattctccacataatccatct
aagggacgtttcggtttatctgaaaccctcagtggaacatatttggtagagagaccaaat
ggtagcagacagacattatcttcagcactgtctcctgggtatgtgctttcccatagccac
tatgagagtgtagactctgagcagtacctcacatgtatgtcacagcacagttctcttacc
atttcccaactctctccagtggcctatctgaaaagtgacacatttcaagaagccaagcca
aaatctggttcatcccaggaagtcctgccaacaaattaccagtctcagaggattgtatca
gaactacagcaaaaccaagctgaaatttctcaagaaactttgccaaaaaatgaaggtatt
tctcagtatgatccttcaaacccaccattatctcttaccttcttgccaaaatctttagaa
aaatgtgacattatagaagaggccataacaggcactgttacaaatgaatcaatacaaaaa
tatgatcccccagtggacacgatgaaccatgatttgctacatgagagaattcctgatatt
ttggatatgatgacaacaatggcaacggaagaatgtttaatgttagattctcatacgttt
atggataaggatatttgctcaactgagtctcatcagtcccaccatgtgaaatgtgatggt
gctctagaggacctggagattatcacagattttggtcggtccactgagaatgtgtgcgtc
tgtgattttgtatctgagccaacctctagcattactgaggacttggttatgacagatttg
ctcctggagaacgtgtttgtggcccagcatgctgtgacacattctgttggcacaagccct
gtcgtgcccactgtgcctagggagacttgcacaaacatggaattgtgtcccgattctgtt
aaagcatcacaaataagtaaaaatacacaagcaacaactactgcagcttctgttccacaa
ggggagtatttgggcagcattatacactggtctactattcaaacacccctgcctgaacca
tcaaacctggaccggctaacttcagggcatgatctcttgataagctcccccttgcttgaa
ctctcaccactagcctcatctacaccgcatgtagcagtaggtaatagtctgccactttcc
tcctttcctatgccctctgctccagcaaaatcattgccgcatactgtactagctgctgct
gctgctcttccccctgtatttgctgcatcccatgattatttcccccaggaagaacatcag
gtagcctgtcataacaacagtccacatccagtgaagcctttgacaccgccagatgagaag
aggtcagaagggcggtctatgctggagaagatcaagtccaccattcatccaggacgaggt
caccaaggagaccaggaacctgagaagaagctcttggtggagggtggagggtcctactac
catctgaaccacagtgagctggtgtcactcctggtacagcgggatgccgagctccaacag
gagagggaggaatatgagcgccatggcttgttgctacagaagcgggaggtggagttaaag
aagatgaaaattttaatccgagatctagaggactacattgacactctgctagtccgcatt
atggaacaaacacctgcactgttgcaagttcgttccaaaattaaatga
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