Ictalurus punctatus (channel catfish): 108263921
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Entry
108263921 CDS
T04658
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108263921
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108263921
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Contactins
108263921
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Others
108263921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Pur_ac_phosph_N
Izumo-Ig
Sp38
Interfer-bind
NDNF
fn3_4
DUF1573
Motif
Other DBs
NCBI-GeneID:
108263921
NCBI-ProteinID:
XP_053533733
Ensembl:
ENSIPUG00000003638
UniProt:
A0A9F7TFT2
LinkDB
All DBs
Position
4:54894..201165
Genome browser
AA seq
1091 aa
AA seq
DB search
MGSPWKPLLLLSIISCLTDFARSVAGRPASYAVVLRMKPDSSSSSLLNPRTRLRQDHGSF
VQDWPPFDRQRLSALNFQEDDHSEESEEFGPVFIQEPDDAIFSLDSEDKKVIMSCEARGN
PAPTYSWLINGTDVDVEADSHYRLIDGNLIIINASEATDFGKYQCRAENSMGAVLSREAF
LQFAYLSAFSGRARGGVSVREGQGVVLMCMPPPHSPEIIYSWVFNEFPSFVAEDSRRFIS
QQTGNLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGVMGEYEPKIEVHFLP
TVLAAKGATVRLECFALGNPVPTITWRKINGNIPKKARLRKSQAVLEIPNIQLDDAGSYE
CKADNSRGGTAFRGHVQVYTAPQWISLINDSQLDSGDHLHWECRATGKPRPSYRWLRNGE
PLNTQSRVQMLNGELMIQKVQPADSGMYQCVAENKYGAIYSSAELKILASAPVFSSNTAT
VIATVSKDASLECRPRASPKPRITWRKGDRKLQSSRRIVVLRNNTLQIINASRADEGSYV
CRAENQFGSAEMTSSLLVKEAMRVDLSPRRVEVTVGESVVLSCKATHDPSLDISFLWQLN
NQPLDAQQDDDHFEYIRTQSSTMDLMIRNILLKHAGKYGCRVQTSADTVLAEAELLVRGP
PGPPGVVIVEEITDTTATLSWSHGVDNHSPISTYNLQARSPFSLGWQTVKTDPDPVTGDM
ESAMAVELNPWVEYEFRVVATNAIGTGDPSAPSRLVRTKEAVPSVAPTNVSGGNGRRHEL
VISWEPVSEEFQNGDGFGYIVAFRANGTRAWKEKMVTSADSTTYKYRDETFPPLTPFEVK
VGVYNNKGDGPFSKAVTVFSAEGEPREAPSDVKASAMSSSEVKVTWKAPSPGPGRPQGYE
VNYWRDSEQEEAGKRKRTVGNETVVLISGLEGNTQYHITVKGFNSIGQGPPSASIQASTK
KNPPSHPPANVMWIQEGNNVSLSWDPVKALDNESDVIGYRVLLRQEGRGHSQVMRTPNTA
AVLTLPEGGTYIIEVCAISEGGEGAASSQIRVLTSSGVRAKSQQRSVHYLPSVFAWTLLL
LTVLMVPSAPW
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccacttctgttgctgtcaatcatcagctgcctgacagacttt
gccagatcggtggcgggcagaccggcgtcgtatgcggtcgtgttgaggatgaagccggac
agctcctcttcctcacttctgaaccccaggacgaggctgaggcaggaccacggttctttt
gtccaggactggcctccatttgacagacagaggctgtcagctctcaactttcaggaggat
gatcacagtgaagaaagtgaagaattcgggcctgtcttcatccaggagccagatgacgcc
atcttctctctggactctgaagataagaaagttataatgagctgtgaagcgagaggaaat
cctgctcctacatacagttggctgatcaatggaacagatgttgacgttgaggctgactca
cactaccgtttgattgatgggaacttgatcataataaatgccagcgaggccaccgatttc
gggaagtaccagtgcagagccgagaacagcatgggagctgtcctgagccgggaagccttc
ctgcagttcgcctatctcagtgctttcagtgggcgagcgagaggaggtgtgtctgtcaga
gaaggtcagggagtagtgctgatgtgtatgcctcctcctcattcacctgagatcatctac
agctgggtgttcaatgagtttccatcttttgtggctgaggacagccgacgcttcatctcg
cagcagacggggaacctgtacatctccaaggtacagccctcggatgtgggtagctacatc
tgcctggtaaagaacacggtgaccaacgcccgggtcctgagtcctcctactccactgaca
ctccgaacagatggtgtaatgggggaatatgagcccaaaattgaggtgcacttccttcct
acagtcctggctgctaaaggagcgacggtgcgactcgagtgtttcgctcttgggaacccc
gttcccacaatcacatggaggaagatcaacgggaacattccgaaaaaggctcgactccgc
aagtctcaggccgtgctggagattcccaacatccaactggatgatgcgggaagttacgag
tgtaaagcagacaattcccgaggagggacggccttcaggggacacgtccaggtgtacacg
gcgccgcagtggatcagtctgataaacgactctcagttggacagcggtgatcatttacac
tgggagtgcagagccactggcaagccacgcccttcttaccgctggttacgcaacggagaa
ccactgaacacacagagccgagtgcagatgctgaatggagagctgatgatacagaaagtt
cagccggccgactcggggatgtaccagtgtgtagctgagaacaagtacggagccatctac
tccagcgctgagctgaaaatcctggcctcagctcccgtgttcagttctaacacagcgacc
gtcatcgccacggtgagtaaagacgcgtctctggagtgcagacctcgagcttcacccaaa
cccaggatcacttggaggaaaggtgacagaaaactccagagcagtcggagaattgtggtt
ctgcgcaacaacacgctgcagatcatcaacgcgagccgtgcggacgagggcagctacgtg
tgtcgagctgagaatcagttcggctcggccgagatgacgagctcgctgctggtgaaagag
gccatgagggtggatctgagcccgaggcgtgtcgaggtgacggtgggggagagcgtggtg
ctcagctgtaaagccacacacgacccctcgctcgacatctccttcctctggcagctcaac
aaccagccgctggacgcccaacaggacgacgaccatttcgagtacatcagaacacagtct
tccacgatggatctgatgatcagaaacattctcctgaagcatgctgggaaatatggctgc
cgggttcagacgagtgctgacacggtcctagctgaagctgagctgctcgtcagaggtccc
ccaggacctcctggagtggtgatcgtggaagagatcacagacacaacagccacattgtcc
tggagtcatggtgtagacaatcacagtcccatcagcacctacaacctgcaggctcgcagc
ccgttctccttgggctggcagacagtcaagacagatccagacccagtgactggagatatg
gagtctgccatggccgtggagctcaacccctgggtggagtacgagttccgggttgtggcc
accaatgccattggtacaggtgaccccagtgctccatccaggctggtccgaaccaaagaa
gcagttccatcagttgctccaaccaacgtgagcggagggaacggacgccggcacgaactc
gtcatatcctgggagcctgtttctgaagagttccagaatggagatgggttcggctatatc
gtggcgtttcgtgccaatggaacacgagcgtggaaggaaaagatggtgacgtcagcagac
tccaccacctataagtacagggatgagacgttccctcctctcacgccgtttgaggtgaag
gtgggtgtgtacaacaacaaaggagatgggcccttcagcaaagcagtcaccgtgttctcc
gcagaaggagagccacgggaagcaccatctgatgtgaaagcatccgccatgtcctcttct
gaggtcaaggtcacgtggaaagcacccagccctgggccaggaagaccccagggatacgag
gtgaactactggagggactcggagcaggaggaggcagggaagagaaagaggacggtggga
aatgagacggttgtgctgatttcaggactggaggggaacacgcagtaccacatcacagtg
aagggtttcaacagcattgggcagggaccaccgagcgcctccatccaggccagcaccaag
aaaaaccccccgagccatccaccagccaatgtgatgtggattcaggaggggaataatgtc
tccttatcctgggacccagtgaaggctctggacaacgagtcggatgttataggctacagg
gtattattacgtcaggaggggcgtggtcacagtcaggtcatgaggaccccaaacacggct
gcggtcctcacactaccagaaggaggaacttatattattgaagtgtgtgccatcagtgaa
ggaggcgaaggagcagccagctctcaaatcagagtgctcacatcctcaggtgtgagggcg
aaaagtcagcagcgttctgtgcattatctgccgtcagtcttcgcatggactcttcttctc
ctgacggtcctgatggtgccttctgccccgtggtga
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