Ictalurus punctatus (channel catfish): 108263942
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Entry
108263942 CDS
T04658
Name
(RefSeq) chitin synthase chs-1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00520
Amino sugar and nucleotide sugar metabolism
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108263942
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108263942
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
108263942
Glycosyltransferases [BR:
ipu01003
]
Polysaccharide
Structural polysaccharide
108263942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
ECSCR
Motif
Other DBs
NCBI-GeneID:
108263942
NCBI-ProteinID:
XP_053533920
Ensembl:
ENSIPUG00000017197
UniProt:
A0A9F7R0V8
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Position
4:10608397..10619590
Genome browser
AA seq
1192 aa
AA seq
DB search
MEERKQKKSEFRQAWDACREVPVIQDEQKIRKRLSFMKWFCCSMVGTLVFVLTVLSKTSF
LILVTLASNVTMSAPIGQKSSAMLSIGCVLVGPNILLLLKSLWKFIFKSAIRPSIKTIIW
VLFVEFLVSLGEAVLTVVAMPHFDIVTNVMILNSVSILSAVFQVVDQCRARCKREDVPHK
PKSCKVECGKWFRPITAIIFIILGYSLFIISYLVTEESPLQVKRSVYLAIVGTIFVSFNW
WENYSSMFPFLKDISKDIANSQNVVCILSSVMKILVTAAVLGAIGIGDPLDWTSLRLTPT
CVSNTIFGLMGIQIVSSAMCRWFVVVACKMHALRRCFVVPMYLSSVVVLLLCLSPLAIFK
QKSKSNMSFCMNQTINTISLNSLMYDITYTLSSRRIVSEMNVVGLVVLGMCALSWWLGLI
LSTGYIWFLKIQRIERTHDLFVKRMYEGAFLEQSMLLNTRFVAREKKNDEGSKGPVTVYL
CATMWHETYDEMMKIIISMFRLDKFRPKTNNHNDASFEFHIYFDDAFKDVQNGTMRHVNE
YAEILVDVIKEVYTIFSDDDLCIFKKKPRLPQQKIISTPYGGRLEYTLPKGNIMMVHLKD
KQLIRHKKRWSQIMYLYYILGWRLNSKYLKMFEMFGHVDKLRNNLKKEKENTYILALDGD
TDFQPSAVMLLIDRLKLYPEVGAACGRIHPTGTGPMVWYQKFEYAVGHWLQKTAEHVFGC
VLCSPGCFSLFRGAALMDDNVMKRYTTKPTEASHHIQYDQGEDRWLCTLLLQQGWRVEYN
AASDAYTNAPQDFKEFYNQRRRWGPSTMANTIDLLGSGGLTTQQNSSISKPYIIYQVISM
GASILGPATICLMIAGSFTFIMNMEQNAALIAATVPPTIYVALCFKVKAEIQIQIAAVMS
VLYAFLMTGTILSIIGDIVKNQTFMTPSGLFLISMTLLYFITAALHPQEFSLVIYGVLYF
LCIPSGYLLLSIYSIVNMNNVSWGTRETGGKVETVAVSAIKRQVIQAACCKCPCWNNSDT
TSVNEPPTKSTVSEEGDLKVHMDSEETERSNECITPQTQRSWIEDLQVKSHDFPLHQDTL
SEDETEFWKELQKRYLEPLKENKEQQEKVAEELKGLRNKVAFVFFICNALWLMATFFLQT
IGKPVTLSIPKMYPNGIVAKDETFSVDPISLMFLLSFTLLLFMQFFAMLYHR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagaaagcagaaaaaaagcgaattcaggcaggcatgggacgcatgcagagaa
gttccagttattcaagatgaacaaaaaatccgaaaacgcctgagttttatgaaatggttc
tgttgtagcatggttggtacactggtctttgttcttacagtactgagtaagacatccttt
ctgattttggtaacacttgcaagcaacgtgactatgagtgctcctataggacaaaaatcg
agcgctatgctgagtatcggctgtgtgttggttggaccaaatattctgcttctgctcaag
agtctatggaagttcattttcaaaagtgcaataagaccatcaattaaaacaatcatttgg
gtgttgtttgttgagtttttggtgtcacttggagaagcggtacttacagtggtggccatg
ccacattttgacattgtcaccaatgtgatgatcttgaacagcgtaagcatcctgtcagca
gtattccaggtagtcgatcagtgtcgtgcaagatgtaaacgggaagatgttccacacaaa
cccaagtcctgcaaagtggaatgtggaaagtggttcagaccaattactgcaatcatcttc
attattctgggctatagcctcttcataataagctacttagtaacagaagaaagccccttg
caagtaaaaagatctgtgtatctggccattgtaggaaccatttttgtttcatttaactgg
tgggagaattacagcagtatgtttccatttttgaaagacatctccaaggacatagccaat
tcccagaatgtggtttgcattctgtccagtgtgatgaaaatactggtcactgcagctgtg
cttggagctattggaattggagatcctttagactggacttccctacgcttgacccccaca
tgtgtgagcaataccatctttggtttgatgggaatccagattgtttcttctgcaatgtgc
cgttggtttgttgtggtggcttgcaagatgcatgccctgcgtcgctgttttgtcgtgccc
atgtacttgtcctctgtggttgttctgcttctgtgcctgagtccacttgccattttcaaa
cagaagtctaaatcaaacatgagtttttgtatgaaccagaccattaacactatttcactt
aattcactgatgtatgacatcacatatacactttcctcacggcgtattgtgtcagaaatg
aatgttgtaggattggtggttcttggcatgtgtgcccttagctggtggctgggactcata
ctaagcactggttacatctggtttctgaagatccagcgcatcgagagaactcacgaccta
tttgtaaagcggatgtatgagggagcatttctggaacagtccatgttgctcaacacacgt
tttgtggccagggagaaaaagaatgatgaaggatcaaaaggccctgtgacagtctattta
tgtgcaacaatgtggcatgagacatatgatgaaatgatgaaaataatcatctcaatgttc
aggctcgacaaatttcgtccaaaaacgaacaaccacaatgatgcttccttcgagttccat
atttattttgacgatgcttttaaggatgtgcagaatggcactatgcgacatgtaaacgaa
tatgctgagatcctagtggacgtaatcaaagaagtatacacaatttttagtgacgacgac
ctgtgtatattcaagaagaagccccgtctccctcagcagaagatcattagcacaccgtat
ggaggtcgtctggagtacacacttcctaaaggcaacataatgatggttcacctcaaggac
aaacagctgatacgacacaaaaagagatggtcccagatcatgtatttatactacattctt
ggctggagactcaacagcaagtacttgaagatgtttgagatgtttggacatgtggataaa
ctgaggaacaacctaaagaaagagaaagaaaacacatacatcttggccctggatggagac
acagatttccagccctctgctgtgatgttactgattgacagacttaaactttacccggag
gtgggagctgcctgcggccggattcaccccactggcactgggcccatggtgtggtatcag
aaatttgagtatgcagtgggccactggctgcagaagacggcagagcatgtgtttggctgt
gtgctctgtagcccaggttgctttagtctcttcagaggtgctgccctcatggacgataat
gtcatgaagagatacaccaccaaaccaacagaagccagtcaccatatacagtacgaccaa
ggagaggaccgctggctctgcactctcttactgcagcagggctggagggtggagtataat
gctgcatcagacgcctacaccaacgcaccacaggacttcaaagagttctacaaccagcgg
cggcgctggggaccctccaccatggccaacaccattgacctgctcggctctgggggcctg
accactcagcagaacagctccatctctaaaccttacatcatttaccaggtcatcagcatg
ggtgcctccattttgggccctgccaccatctgcctgatgatagcaggaagcttcactttc
ataatgaatatggaacaaaatgctgctctcattgcagccacagtgcctccaacgatctac
gtggcactgtgcttcaaggtgaaagctgaaatacagatccagatagcagcagtcatgagt
gttctgtatgcgttcctcatgactggaacgattctctccatcataggtgacatagtaaaa
aatcagacatttatgacccccagtggcctgtttctgattagcatgactctactgtacttc
atcacagcagctcttcaccctcaggagttttccctggtcatctatggggtattgtatttc
ctctgtatacccagtggctatctcctgctttctatttactccattgtgaatatgaacaat
gtctcatgggggacacgagagactggtggtaaagtggaaactgtagcggtgagtgccatc
aagaggcaggtcatacaggctgcatgctgtaaatgcccctgctggaataacagtgacact
acaagtgtaaatgaaccaccaacgaaatccacagtatctgaggagggagatcttaaggtc
cacatggattctgaagaaactgagaggtcaaatgaatgcatcacaccacaaactcagcga
agctggatcgaagatctgcaagtaaaatctcatgattttccacttcaccaggacacactc
tcagaggatgaaactgagttttggaaagaactgcagaaacggtatttagaacctcttaaa
gagaacaaagagcaacaggaaaaagtagcagaagagctcaaaggccttagaaacaaggtg
gcatttgtattctttatctgcaatgctctttggttgatggctaccttcttcctccaaacc
attggcaagcctgtcaccctgagtattccaaaaatgtatccaaatgggattgtggcaaaa
gacgaaacattttctgttgatccaatatcactgatgtttcttctgagctttacattgcta
ctatttatgcaatttttcgccatgctttatcacaggtaa
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integrated database retrieval system
