Ictalurus punctatus (channel catfish): 108263959
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Entry
108263959 CDS
T04658
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108263959
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other basic domains
RF-X
108263959
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
108263959
NCBI-ProteinID:
XP_017320681
Ensembl:
ENSIPUG00000016674
UniProt:
A0A2D0QSH9
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All DBs
Position
4:complement(10427033..10446715)
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AA seq
734 aa
AA seq
DB search
MHCGLLEEPDMESTESWIERCLNESESKPYSSHTSLGNMSTDTDNEEKENNRASKRHSTP
ATLQWLEENYEIAEGVCVPRSALYMHYLDFCEKHGTQPVNAASFGKIIRQQFPQLTTRRL
GTRGQSKYHYYGLAVKESSQYYDVMYSKKGGAWVNETGKKEVTKQTVAYSPRSKLGTLLP
EFPNVKDLNLPAILPEQKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHM
LPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLRVALH
DLPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSIT
KQTLYTMEDSREDQRRLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVDRCVVRVAGKRPGS
LKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANE
LMRAMKGEGTTGDSSEDMMVTESASVSPEPYSPPKLVPSVGAVTTSTPTSAPSPEYNSVS
VTSGALQSYTWSLTYTVTTSGGSPPDGGSQLSCMRSSAPVHPTSSAHRMQVYPYRDEHSY
TGSYNYSSYTNQHHHAIQSQYQSLPHDAGLPTPLHYSSYHRSSAQYSLNSPMSRMEPCLM
GGAPRLHATPMTPRWPDVPSANSYSSTPMHSTRYASTGDMYSSLTPRRNSEYEHAQHFPG
FAYISGEATTGWAK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtgggctgctcgaagagcctgatatggaatccacagagagctggattgaaagg
tgcctgaatgaaagcgagagcaaaccctattccagccacacgtccctggggaacatgtcc
acggacacggataatgaagagaaggaaaataaccgggcatctaaacgtcattcaacacct
gcaactttacaatggttggaggagaactatgagattgctgagggtgtgtgtgtccctcgc
agtgcactttacatgcactatctagacttctgtgagaagcatggcactcagcctgtcaat
gctgccagttttgggaagataataaggcagcagttccctcagttaacaacacgaaggctg
ggaacaaggggtcaatcaaagtaccactactacggcctagcagtgaaggagagctcccag
tattacgatgtgatgtactccaagaagggtggcgcctgggtaaacgagacgggcaagaaa
gaggttaccaagcagacagtggcgtattcaccccgctccaaactgggcactcttctgcca
gaatttccaaatgtcaaagacctaaatctgcctgccattctcccagaacagaaggtttca
acgtttatcatgatgtacagaactcactgccagagaatactagacaccgtcatacgagcc
aatttcgatgaggtccagagcttcctgttgcatttttggcaaggcatgcctccacacatg
ctgcctgtattgggctcatccactgtagtaaacattgtaggggtgtgtgactccatctta
tacaaagccatttcaggagtcctcatgcccacagtcctgcaggccctgcctgatagcctg
actcaggtcatcaggaaatttgctaagcagcttgatgagtggttgagggtggcgctacat
gatctacctgaaaacctgcgcaacatcaagtttgagttgtcaagaagattctcccagatc
ctcaagcggcaaacgtcattaaatcatctttgtcaggcatcacggaccgtgatccacagt
gcagatattacctttcagatgctggaggactggaggaatgtagatctgaacagcatcact
aagcagacactttacacgatggaggactcgcgggaggaccagagacgactcataatccaa
ttgtatcaggaatttgaccggctgctggaggatcagtcccccattgaagcgtacatcgag
tggctggactctatggtggacagatgcgttgtgcgggtggcggggaagagacccggatcc
ctgaagaaggttgctcagcagtttcttctcatgtggtcctgttttgggacaagagtgatc
cgggacatgacgctgcacagcgcccccagctttggctcattccacctgattcatctgatg
tttgatgactatgtgctgtacctgctggagtcactgcactgccaggaaagagccaatgag
ctgatgagggcaatgaagggagagggaactacaggagacagtagtgaggatatgatggta
accgagagcgcctccgtatcccctgaaccctactctcctccgaagttggtgccttcagtg
ggagcagtaaccaccagtaccccaacttcagccccatccccagaatacaacagtgtgtct
gttacctcaggagctcttcagtcatatacatggtcccttacatacacagtgaccacgtca
ggaggcagtccccctgatggaggatcccagctgtcctgcatgcgtagcagcgccccagtg
caccctacctcgtctgcacaccggatgcaagtttacccctacagagacgagcatagctac
acgggcagctacaactacagcagctacacaaaccagcatcatcatgccatccagagccaa
tatcagagtctgccccatgatgcaggcctccccaccccactgcactattcttcttaccac
cgttcctctgcacagtactcattgaacagcccgatgtcccgcatggagccatgtctgatg
ggtggtgctcctcggctgcatgcgaccccgatgaccccccgctggccagatgttccctca
gccaacagctactccagcactcctatgcactcaacacgctatgcctctacaggggacatg
tactcctctttgacaccacgcagaaactctgaatatgagcatgcacaacactttcctggc
tttgcctatattagtggagaagctactacagggtgggccaaatag
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