Ictalurus punctatus (channel catfish): 108263975
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Entry
108263975 CDS
T04658
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108263975 (slitrk3a)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
108263975
NCBI-ProteinID:
XP_017320716
Ensembl:
ENSIPUG00000005376
UniProt:
W5U8I9
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Position
4:complement(25084157..25105396)
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AA seq
870 aa
AA seq
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MLWVTLLSTIALGWTTPIPLLDESEEIDEPCFDPCYCEVKESIFHVHCDSKGFINVSQIS
QSWTRPFTLNLQRNSMRKLYFNSFLHLNNAVSLNLGNNALQDIHAGAFNGLCILKKLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKKIESGAFRNLHKLRVLILNDNLIPMLPNFLF
RSVSLTHLDLRGNRLKTLTYKGTLEYVGHSLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGDITCEYPFHFHGKDLREIKRSELCPLLSEAEIEVKLSIPRLPFSNENMWPTKPSSM
LSSFHNTASSVEYRERYVKPTKRPRPTKTPPTPRSLYPGPNQPPVPGYQTRPPIPIICPT
GCMCNLHINDLGLTVNCKDKGFHNISELLPRPLNARKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIERLTPGMFRGLQMLSYLYLEYNVIRDI
QPAAFSLMANLQLVFLNDNLLRTLPVDAFVGTSLSRLNLRNNYFLYLPVSGVLEHLDSIV
QIDLHQNPWECSCDIVPLKQWIEKLSSVIVVGEVICKTPEFAFGKDLRTLELELICPEMK
FSAASPGLANDVTSTSDSGLGYTPSTGAVPLSVLILSLLILFISAVFVAAGLFAFVLRRR
KKLPFKKRQEVMDLTGMQMQCRIFEEQQTSPEKPASSHVYDYIPHPVTQMCNNPIYKPRE
GEIDGERFSETKENSSNYRTLLEKEKEWTMAVSNSQLNTIVRVNQSGDVPGFHENGMLCP
TVIDSQRPTPTVGFVDCLYGTIPKLKDMHIAHAHPPGMQYPDLQQDARLKETLLFTGGKE
FPEQNEYLELRAKLQTKPDYLEVLEKSYRF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtaaccctgctaagcacaatagctttagggtggactacgccgatccccttg
ctggacgagtctgaggaaatagacgagccctgcttcgacccttgctactgtgaagtcaag
gagagcatttttcatgtgcattgcgacagcaaaggatttataaatgtcagccagatttcc
caatcatggacaaggccctttacgctcaatttgcagaggaactccatgcgcaagttgtat
tttaacagttttttgcacctcaacaatgctgtgtcactcaatttggggaacaatgcactg
caggacattcatgctggtgcattcaatgggctgtgtattttgaaaaagctctttctacat
gagaacaagctggaggtgttcagaaatgacacttttcttggacttgagagccttgaatac
cttcaggctgattacaatgtcataaagaaaatagaaagtggtgcttttcgaaacctgcac
aaactcagagtgcttattttgaatgacaatttgatacccatgctccccaattttttattc
aggtctgtatcattaacgcatcttgatttgcgtggcaatcggctaaagactcttacatat
aaggggacgttggagtatgtgggtcatagtctgatggagattcagcttgaagaaaatcca
tggaactgcgtatgtgagattgtacagctcaaaacatggctggagagaataccgtacaca
gctctcgtgggtgatatcacatgcgagtatccatttcactttcatggaaaggatctccgc
gagatcaaaaggagcgagctatgtcccctgctatctgaagctgagatagaggtaaaactc
agcatcccgaggctacctttcagtaatgagaacatgtggcccaccaaaccctcatccatg
ttgtcatctttccataacactgcctcctcggtggagtacagagagagatatgttaagcca
acaaaacgacctagacctacgaaaacgccaccaactccacgaagcctttatcctggtcca
aaccaacctcctgtacctggctatcaaacgagaccacctattcccatcatctgcccaaca
ggatgtatgtgtaatttacacatcaatgacttgggactcactgtaaattgcaaagataaa
ggctttcacaacatctctgagctcttgccacggccactaaatgccagaaaactctatctg
agtgggaacttgattcagaaaatatacaggtcagatttttggaatttctccagtctggat
ttactccatttgggtaacaatcggatatcatatgttcaagaaggtgccttcatcaacctg
ccgaatttgaaaagtttatacttgaatggtaatgatattgaaaggttgactccaggaatg
ttccgtggtttgcagatgctcagctacctttatttagagtacaatgttattcgagatatt
caaccagctgctttcagcctgatggcaaacctgcagctggtttttttaaatgacaacctg
ctgcgcacgcttcctgtcgatgcttttgttggcacctccctgtctaggctgaatctacgc
aacaactattttctgtatctgcctgttagtggagtgctggagcaccttgactccattgta
cagattgatctgcaccagaacccgtgggaatgttcgtgtgacattgttccactcaagcag
tggatagagaaactgagctctgtcattgtggttggagaagtaatttgcaagactccagag
tttgcgtttggcaaggaccttcgcaccctggaactcgagcttatctgcccagaaatgaaa
ttttccgctgcttctcctggacttgctaatgatgtgacttccaccagtgactctggatta
ggatacaccccttccacgggagctgtaccactttcggttctcatcctcagtctcttgatc
ttgttcatctctgctgtctttgttgctgctggcctatttgcttttgtactaaggagaagg
aagaaactcccattcaagaagcgtcaggaagtgatggatttgactgggatgcagatgcag
tgtcggatatttgaggaacagcaaacctcacctgagaaacctgcctccagccatgtttat
gattacatcccccaccctgttactcagatgtgcaacaatcccatttacaaaccacgtgaa
ggggaaatagatggagaacgtttttcagagacaaaggaaaacagcagtaattatagaact
ctgttggagaaagagaaggagtggactatggctgtgtcaaattctcaacttaacaccatt
gtcagggtcaatcagtctggagatgtgcctggatttcatgagaatggcatgctttgcccc
acagtgattgacagccagagaccaactccaaccgtggggtttgtagactgcctttatggc
acaattccaaaattaaaggacatgcacatcgcacatgcacatcctccaggaatgcaatac
cccgacttgcagcaagatgccagattaaaagaaactctacttttcactgggggaaaggaa
tttccagagcaaaatgaatacctcgagttaagggccaaactccaaaccaagccggattac
ctcgaagtcttggagaaatcatataggttctga
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