Ictalurus punctatus (channel catfish): 108264045 Help Entry 108264045         CDS       T04658                                  Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04142   Lysosome Brite KEGG Orthology (KO) [BR:ipu00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     108264045  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ipu04131]     108264045 Membrane trafficking [BR:ipu04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     108264045  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     108264045    RAVE complex     108264045 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_IFT140_1st EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_Gbeta Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Vps41 NBCH_WD40 Beta-prop_ACSF4 DUF3772 Motif Other DBs NCBI-GeneID:  108264045 NCBI-ProteinID:  XP_047009440 Ensembl:  ENSIPUG00000017769 UniProt:  A0A979EQD6 LinkDB All DBs Position 4:complement(34872949..34907637) Genome browser AA seq 2946 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDIVILASDFECVQIIPGAQHGNIQV GCVECSHQLGRIAASYGNTVCIFEPICTNLNKRHKQLNYQWQKTGQFLLNAMTYNLAWDP QGNRILAATEWLQLWAPPTADTLLEEDEEEKSHPVLNDWKCVWQCKTASAVRVIKWSPDG EYFATVGKDDCLLKVWYSTLGWRSVMVDVCERKSGSLHFSFIYLAHPRTVTGFSWRKTSK YMAKGSVCNVLLTSCVDGICRLWSETLLPEDSLLGGQITENNSSTSSLQHTGQKDKIQHA LESIHHLKQLRRGRRRSSALVTHTELLPSQLNSQHTHRHITHHGNALCHFHISASINPNT DIPAALAGSGLFSSVDGNGGFMVHWLNNKDLSFTSSMDEFMQHLRKFSEQNLEHAADDDR QDGTAKFDLDLDEMSDRASEHDDGEHEGSTKASSPGSSSSLPPPSVLLERKMESLTLEWN RSPDMLFTIHPVDGSFLVWHIKYVDEYIPGIFRQVQVAFSSRIPVAFPTGDANSLSKNIM MYACTFPERDAQVSVEQDRKCASLGTVIGPAVMMVSKHVDGSLNQWAVTFAEKSAFSNVL TVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNAVLTPPPGQDDPQGAPSRPSRGLAPK EMSSNAATRTFHDPNAIYSELILWRVDHIGPLSCTGGVSEIARINSLHTAAFSNVAWLPT LIPSSVLGTYCNSASACFVASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQ QSTARPGCIIELDVITNQCGSNTQLLHVFQEDFILGYKPHDDFTDINTTEFPSADEFHPP PFSEKFFLVVIEKDENRNSVLQMWHLHLKSVHACVDDTPQTQPYQNQLTVPHMLANADSS PESTPGQSPLPRSSSSANLQSASKLILSSTLVYSHRLELPLGVEVIRATPSAGHLSSSSI YPVCLAPYLIVTACSDGRVRFWRCSVDSEDSPSYRWEPWCLLNEEEDNNSALSLSGRPVA VSCSYTGRLAVAFKQLVSTEHSSSSKDFSMHVSIFECESTGGSEWVLEQTIHLEDFGKPV SALDPRISVDSNLVVYSKSDLFVRTQNPNIKHFVHLDWLSKEDGSHILTVGVGASILMYG RISGIVAEQTGGKDGMAVVTLPLGGSVKQGVRSRWVLLRSVDLVSSVDGTPSLPVSLSWV RDGILVIGMDCEMHVYAQWYQDKKPSDSEDNDDAFMVKKGAIEMTDDVIRVPAVIQDGGL FEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVAVVRDAVAGEGGAR RHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALLSADLDTSYRNKLADDVK CQERETRKSSEDQYSELFQDSAENADDFASFAWADKAEKKEKKTRVIDLSQYGPTCFGPE HAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVGGATDKQYRGGEALDECGLRY LLAMRLHTCLLTSLPPLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDLQWSE LRAVGVGWWIRNINTLRRMVEKVAKAAFQRNNDPLDAALFYLAMKKKAVLWGLFRSQSDE KMTQFFSHNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMDDIQ LAMIVARLYEADFESSSTCQGILYEKVLGCKRDGTEFSCSKMHPDPFLRSIAFWIMKDYT RALDTLLEQTPRDDDENPDVMVKSCNPVVFSFYNYLRTHPLIVRRHFAPPDGSERNSSAD QINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKTSKAASTANVGEVQNGVRASD LDWSAPVMKPDDDLKLDWGDEEEEEEEEEEDKKGLLMKEKKKEEEEEEEKASDWKVDVIA EQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIEAMHRICNYKVEGQGSVG ELEKWSGSVSGEGDEFERRSDTDVYERHLQDRRRLQAKQLHAERRKAWLRKNEALLRVFL TYCSLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLATTLPLLSASIAPTKTVI ANPVMHLNNHIQDILYTIVQTEAPPHPDIPDNRVNALHTLAASLSACIYQALCDSHSYSS QSEANQFTGMVYQGLLLSERRRLRTESIEEQATPTSAPAHWPGVASLIGLLASSQGEDQP RLNVMLCEAVVAVYLSLLLHGLGTHSTNELFRLAAHPLNPRMWAAIFGGGAKIIVKPKRQ AEVSPVAPPPTPPAEEVDRQRRRFNMRMLVPGRPVKETQATPPPVPAERPAYKEKFIPPE LSMWDYFVAKPFLPLSDSGALYDSDESGDEDEEDDDDAFLSDTQMTEHSDPNSYSWCLIR LVMIKLALHNVKNFLPIAGLEFTDLPMSSPLCNSVLKCMENWEQQLQEKMNRFDGPPPNY INTFPTDLSVGGSPAALRHKAMLQPDNTPFRAKHRLSFPARRLWHFLVKQEILQETLIRY IFTKKRKQSECLENHVDCHTHNCVAGAHRINKVEADLGYPGGKAKVIHKESDIIMAFAIN KAKPSEIVLASTHDVQEVDVSTLLAAQPYTWIGDDFDKESRSSEDDYRSSHTNIAQASSA PFAPPPMSVSASMPWLGSGQTSMGASVIVKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMF EWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQC HSKVCGDFSFITSSSLIATAGHSTDGRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAP KQQLIISGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDASEDFFITGSAEGNMKVWK LAGHGLMHSFSTEHAKQSIFRNIGAGVMQIETCPGNRIFTCGADGTLKMRVLPDRYNTPS SIFDIL NT seq 8841 nt NT seq  +upstreamnt  +downstreamnt atgcatctccaccaagtgctgacgggagccgtgaatccgggagactgctgctactcggtg gggagcgttaatgacatcccgttcacggcgtatggttcggggtgtgatattgtgatcttg gccagtgatttcgagtgtgtgcagattatccctggagctcagcatgggaacatccaggtg gggtgtgtggagtgttcacaccaactgggacggatcgccgcatcatatggaaacaccgtg tgcattttcgagccaatctgcaccaacctgaacaagagacacaagcaactgaattaccag tggcagaagactggacaatttttactcaatgccatgacctacaacctggcctgggaccca caaggtaaccgtatcctggcggccacggagtggctgcagctttgggctccgcccaccgca gacacactgctggaggaagacgaagaagaaaaatcacaccccgtcctcaacgactggaag tgtgtgtggcagtgcaagactgcttctgctgtgcgtgttattaaatggtctcctgatggg gaatacttcgccactgtgggaaaggacgactgcctgttgaaggtgtggtactccaccctg ggatggaggtcggtgatggtggatgtgtgtgagaggaagtccggctcgctccacttctcc ttcatctatctggctcatcccagaaccgtcacggggttctcctggaggaagaccagcaaa tacatggccaagggctctgtgtgtaacgtgttgctgacgtcgtgtgtggatggaatctgt cggctgtggagcgagacgctgctgcctgaggacagtttactgggaggacagatcaccgag aacaacagctccacatcatcactgcagcacaccggccagaaagataaaatacaacatgcc ctggagtcgatccaccacctgaagcagctcagacggggtcggaggagatcgtcagctctg gtcacacacaccgagctgttgcccagccagttaaactcgcagcacacacatcggcacatc actcaccacggcaacgcgctgtgtcacttccacatctcagccagcattaaccccaataca gatatcccggcggctctggccgggtccggtctcttctcctctgtagacggtaatggaggt ttcatggttcactggctgaataataaggatctgagcttcacctcctccatggacgagttc atgcagcacctgaggaagttctccgagcagaacctcgagcacgctgctgacgacgacaga caggacggaactgcaaagtttgacttggatctggatgagatgtcagacagggcatcggag catgatgatggagagcatgagggcagtaccaaggcgtcgtcccccggctccagcagcagt ctccctcctccctccgtcctcctggagcgcaagatggagtccctcactctggagtggaac cggagccctgacatgctcttcaccatccacccggtcgacggatccttcctggtctggcac atcaagtacgtggatgagtacatccccggaatcttccggcaggtccaggtggcgttctcc tcgcggatccctgtagcgttccccaccggcgatgctaactctctgagtaagaacatcatg atgtacgcctgcactttccccgagcgggacgcccaggtctctgtggagcaggacaggaag tgtgcgtctctgggcaccgtgattggcccggccgtcatgatggtgtcgaagcacgtggac ggttctctgaaccaatgggctgtgacgttcgcagagaagtccgccttctccaacgtgctc acggtttcacacaagttccgttactgcggccaccgtttccatctcaacgacctcgcgtgc cacacggtcctgcccctcctactgacctcatcgcatcacaacgctgttctgactccgccc cctgggcaggacgacccacagggcgctccatcgcgtccatccagaggcctcgctccgaag gagatgagcagcaacgcggcgactcggaccttccatgacccgaatgccatttacagcgag ctgatcctgtggcgtgtcgaccacatcgggccgctctcctgcacggggggcgtgtccgaa atcgcacgcatcaactccctgcacaccgccgccttctccaacgtcgcctggctgcccacg ctgatccccagctctgtactcgggacgtactgtaactcggcaagtgcgtgttttgtggcg tcggacgggaagaacctgcgtctctatcaagccgtcgtggatgccaggaaactgctggat gaactgtctgaccctgagacctcgaaattagtgggtgaggttttcaacattgtgagtcag cagtccactgcacgcccaggctgcatcatcgaattggatgtaattactaaccagtgtggc tcgaacacacagctactccacgtctttcaggaggattttatattaggatataaaccgcat gatgacttcaccgacataaacacgactgaattcccttcagctgatgagtttcacccgcct ccattctctgagaagtttttcttggtcgtgatcgagaaagatgagaacagaaactcggtg ctgcagatgtggcatcttcatctgaaatctgtgcatgcgtgtgtggatgacactccacag acccagccgtaccagaaccagctgacggtcccgcacatgctcgccaacgctgactcgtct cccgagtccacaccgggtcagagcccccttcctcgctcgtcttcctcggctaacctgcag tccgccagcaaactgatcctcagctccaccctcgtctacagccacagactggagctcccc ctgggggtggaggtgatccgtgcaacaccgtctgcaggtcacttgagctcttcctccatt tacccggtgtgtttggctccgtatctgattgtgacggcgtgttcggatggacgcgtcaga ttttggaggtgctccgtggattcagaagattctccctcgtaccgctgggagccgtggtgc ctcctgaacgaggaggaggacaacaacagtgccctgagcctttcgggtcgccccgtcgct gtcagctgctcctacacaggccgcctggccgttgcgttcaaacagttagtctctaccgag cacagctcgagctctaaagacttctccatgcacgtctccatcttcgagtgcgaatccaca ggtgggtccgagtgggttctggagcagactatccatctggaggacttcgggaaacctgtc agtgctttggaccccagaatcagcgtggacagcaacctggttgtttatagcaagtctgat ctgtttgttagaacacagaaccctaatattaagcacttcgtgcacctagattggctctcg aaagaagacggatcgcacatcctcaccgtcggagtcggagccagcatcctgatgtacgga cggatctcgggcatcgtcgccgagcaaaccggtgggaaagatggcatggccgtcgtcacc ctgcctctagggggcagtgttaagcagggcgtccgctcccgctgggttcttctgcgctcc gtcgatctggtttcctccgtggatgggacgccgtctcttcccgtttctctttcttgggtc cgagacggaatcctggtgatcgggatggactgcgagatgcacgtctacgctcagtggtac caggataagaagcccagcgactccgaggacaacgatgacgctttcatggtgaaaaaaggc gcgatcgagatgacggacgacgtgatccgagttcctgccgtaatccaagatggtggactt ttcgaggcggcgcattctctgtcccccactctgcctcagtaccaccccacccagctgtta gagttgatggatttagggaaggtgagacgtgcgaaggccatcctgtctcacctggtcaag tgcatcgctggcgaggtcgccgtggttagagatgccgtggcaggagagggcggagccagg cgacacctgtctcgcaccatcagcgtcaccggaagcaccgccaaggacacgatcgtcgct gggagagacggcgggcgcgattacacggaaatcaactccatccctccgctcccgctgtac gccttgctctcggccgacctcgacacgtcttacagaaacaaactagccgacgacgtgaaa tgtcaggagcgggagacgcggaagtcttcagaggatcagtactcggagctgttccaggac tcagccgaaaacgctgatgactttgcgagcttcgcatgggcggacaaggcggagaagaag gagaagaagactcgtgtgattgatctgtcgcagtacggccctacctgtttcggtccggaa cacgcacaggtgctctcctctcacctgatgcactccagcctgcctggactcacccgcctc gagcagatgttcctggttgcgcttgccgatacggtggcaaccaccagcgcagaggtgggc ggagccactgataaacagtacagaggtggtgaggctctggatgagtgcggtctcaggtac ctgctggcgatgcgtttacacacctgtctgcttacatcacttcctcctctgtaccgcatg cagctgctgcaccaaggcgtctctacgtgtcactttgcgtgggcgtttcactccgaggct gaggaggagatgttgaacatgatcccagccatgcagagaggagacctgcagtggtccgag cttcgcgctgtcggtgtcggctggtggatccgaaacatcaacacgctgagacgtatggtg gagaaggtggccaaagcagcgttccagaggaataatgatcccctcgatgctgcacttttc tacttggccatgaagaagaaagctgtgctctggggcctgttcaggtctcagagtgatgag aagatgacacagtttttcagccataacttcagtgaggatcggtggaggaaggcggcgctg aagaacgctttctctctgctggggaaacagcgcttcgagcagtcggccgccttcttcctg ctcgctggatcactcaaagacgccatcgaggtgtgtttggagaagatggatgacatccag ctggccatgatcgtcgctcgcctgtacgaggccgacttcgagagctcgtccacctgtcag gggatcctgtacgagaaggttctgggctgcaaacgggacggaaccgagttctcctgcagt aaaatgcacccggacccgttcctcaggagcatcgctttctggatcatgaaggattacacc cgagcgctggacaccctgctggagcagacgcccagagacgacgacgagaatccggacgtg atggtgaagtcctgcaacccggtagtgttcagtttctacaactacctgcgcacacaccct ctgatcgtacgccggcacttcgcgcctccggacggctcagagcgcaacagcagcgccgat cagatcaacctgatcgagcgcaagctcttcttcaccaccgctaacgctcacttcaaagtg ggctgccctgtcctagcgctcgaggtgctgtccaaaattcccaaggtgaccaagaagacc agtaaggcagcttccacggctaacgtcggcgaggtccagaacggtgtccgggcctccgat ctggactggagcgcgccggtgatgaagcccgatgatgacctgaagctggactggggagat gaggaggaggaggaggaggaggaggaggaggataagaaggggttgctgatgaaggagaaa aagaaggaggaagaggaggaggaggagaaagcgagcgattggaaggtggacgtgatcgcc gagcagctgaagttccgagcatgtctgaagatcctgatgacggagctgcgcacgctcgcc accgggtacgaggtggacggagggaaactgcgcttccagctctacaactggctggagaag gagatcgaggccatgcaccgcatctgcaactataaggtggaaggccagggttcggtgggt gagctggagaaatggagcggcagcgtgtcgggtgaaggggacgagtttgagcggaggagt gacacggatgtgtatgagcgccacctgcaggaccggcgcagactgcaggccaaacagctg cacgctgagagacggaaagcctggctgaggaagaacgaggcgctgctcagagtcttcctc acctactgcagcctgcacggagccaaagggggcggagtcacatctgtacgcatggagctg ctcttcctgctgcaggagtcacagcaggagacaacagtgaagcagctgcagtccccgttg ccattggcaacgacactgccgcttctctcagctagcattgctccaactaaaacagtcatc gctaatcctgtcatgcacctgaacaaccacatccaggacatcctgtacactatagtacag accgaagctccgccccatcctgacatacctgataacagagtgaatgcactacacactttg gctgcttctctgtctgcctgcatttaccaagcactgtgtgacagccacagctacagcagt cagtcagaggcgaaccagttcacaggaatggtgtaccagggtctgctgctcagcgagagg cggagactcaggacggagagcatagaagaacaggccacacccacctccgcccctgcacac tggccaggtgtggcgtctctgattggcctgttggcgagctctcagggtgaggatcagccg aggctgaacgtgatgctgtgtgaggccgtggtggctgtgtatctgagcctgctgctgcac ggcctcggcacacactccactaacgagctgttccgcctcgccgcccacccgcttaaccca cgcatgtgggctgccatcttcgggggcggagccaagatcatcgtcaagcccaagcgacag gccgaggtctcgcctgtagccccgcccccgacacctcctgctgaggaagtggaccgtcag cgccgacgctttaacatgcgtatgctggttccgggtcggcctgttaaagagacacaggcc acgcccccgccggtccctgccgaacgccccgcctacaaagagaagttcatccccccggag ctcagcatgtgggattactttgtggcaaaacccttcctgcctctatcagacagtggagct ctgtatgactctgatgagagcggtgatgaagatgaggaggacgatgatgatgcgttcctg tctgatactcagatgactgagcacagtgacccaaactcatacagttggtgtctgatccgc ttggtgatgattaaactcgctctacacaatgtgaagaacttcctccccatcgcaggactc gaatttacagatctgcccatgtcgtctccgctctgtaactctgtactgaagtgtatggag aattgggagcagcagctgcaggagaagatgaacagatttgatggtcctccacccaactac ataaacaccttccctacagacctcagtgtgggtggaagccccgctgcactgcgccacaaa gccatgctgcagcctgacaacacgcccttcagagcgaagcaccgcctctccttccccgcc cgccgtctttggcacttcctggtgaaacaggaaatcctccaggagactctgattcggtac atcttcaccaagaagaggaagcaaagtgagtgtttagagaaccatgtggactgtcacaca cacaactgtgtagcaggagctcacagaatcaacaaggtggaggcggatcttggttatcca ggaggaaaagctaaagttatccacaaggaatccgacatcatcatggcttttgctatcaat aaggctaaacccagtgagattgtcctggcctcgactcatgatgttcaggaagtggatgtt tccactctgctggctgcgcagccatacacctggatcggagatgactttgacaaggagtca cgcagctcagaagacgactatcgctcctcccacaccaacatcgcacaggcaagctccgcc ccctttgctcctccgccgatgtcggtctccgcctcaatgccatggctcggtagcggacaa actagcatgggcgctagcgtgattgtgaagaggaacttgaacaacgtgaagagaatgacc tcccatcccatctaccagtactatatgacaggagctcaggatggcagtgtgaggatgttt gaatggaatcgcccacagcagctcatctgcttccgacaggcaggaaacgcccgagtcaca cgactctatttcaactcacagggcaataagtgcggagtggccgatggtgaggggttttta agtctgtggcaagtgaatcaaacttcatcaaaccccaaaccatatttgagttggcagtgt cacagtaaggtgtgtggtgatttctctttcatcacttcctccagtctcatcgctacagca ggacactccactgacggcaggaatgtgtgtctgtgggacactctgatctctcccagtaac accatggtgcatgcgttcccctgtcatgagaacggtgctacggttctgcagtacgccccg aaacagcagctgatcatctctggagggaggaaaggcttcgtgtgcgtcttcgacatccgt cagaggcagctgttacacaccttccaggcccacgactcggccattaaagccttagctctg gacgcgagtgaggacttcttcatcaccggctcggccgagggaaacatgaaggtttggaag ttagcgggtcacgggctcatgcactcgttcagcaccgaacacgccaagcagtccatcttc cgcaacatcggcgccggcgtgatgcagatcgagacatgtcccggtaaccgtatcttcacc tgcggcgctgacggaaccctgaagatgagggttctccccgatcgctacaacaccccgagc agcatcttcgacatcctctaa

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