Ictalurus punctatus (channel catfish): 108264056
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Entry
108264056 CDS
T04658
Symbol
mc1r
Name
(RefSeq) melanocyte-stimulating hormone receptor
KO
K07375
tubulin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04517
IgSF CAM signaling
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108264056 (mc1r)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108264056 (mc1r)
09144 Cellular community - eukaryotes
04540 Gap junction
108264056 (mc1r)
09142 Cell motility
04814 Motor proteins
108264056 (mc1r)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108264056 (mc1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108264056 (mc1r)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108264056 (mc1r)
04147 Exosome [BR:
ipu04147
]
108264056 (mc1r)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108264056 (mc1r)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108264056 (mc1r)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108264056 (mc1r)
Exosomal proteins of colorectal cancer cells
108264056 (mc1r)
Exosomal proteins of bladder cancer cells
108264056 (mc1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
7tm_1
7TM_GPCR_Srsx
7tm_4
Misat_Tub_SegII
Tubulin_3
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
108264056
NCBI-ProteinID:
XP_053534206
UniProt:
A0A9F7RCQ0
LinkDB
All DBs
Position
4:complement(3000443..3019176)
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AA seq
849 aa
AA seq
DB search
MNTMEPSLSMDYMDNVTLNVTPSDTNMTGITQIMIPQELFLMLGLISLVENILVVAAIIK
NRNLHSPMYYFICCLAVSDMLVSVSNVVETMFMLLTDHGLLSVTARMLRHLDNVIDIMIC
SSVVSSLSFLCTIAADRYITIFYALRYHSIMTTQRAITIIAMVWLTSITSSSLFIIYHTD
NAVIACLVTFFGITLVFTAVLYLHMFILAHVHSKRIMALDKNRRQATSMKGAITLTILLG
VFIICWGPFFLHLILILTCPTNPYCKCYFSHFNLFLILIICNSLIDPLIYAYRSQELRKT
LKEIVLCSWCFVIYGADAAASPRLQPVGFSAASDWPAPAWLSDVTGHVLNQHRLGFKRPV
RAVRVFRRQLAGGDREQHTDTHTHIHIHTLTHTHTHTLRMREIVHIQAGQCGNQIGAKFW
EVISDEHGIDPTGNYVGDSDLQLERISVYYNEASSSKYVPRAILVDLEPGTMDSVRSGAF
GHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGG
GTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYC
IDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFP
RLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRM
SMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRI
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDE
EESEAQIQK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatggagcccagcctgagtatggactacatggacaatgtcaccctcaatgtg
actcccagtgacacaaacatgacgggtatcacccagatcatgatccctcaggaactgttc
ctgatgctgggattgataagcctggtagagaacattctggttgttgcagccatcatcaag
aacagaaacctgcattctccgatgtactatttcatctgctgcctcgccgtgtccgacatg
ctggtcagcgtgagcaacgtggtggagacgatgttcatgctactcacggaccacggcctt
ctgagtgtgacggcaaggatgctgcgtcacctggacaacgtcatcgacatcatgatctgc
agctctgtggtgtcctcgttgtccttcctgtgcaccatcgcagccgatcgctacatcacc
atcttctacgccttgcgctaccacagcataatgaccacacagcgtgccatcaccatcatt
gcgatggtttggttgaccagcatcacctccagctcgctgtttatcatctaccacactgac
aacgcagtcatcgcctgtctcgtgaccttcttcggcatcacgctggttttcacagcggtg
ctctatctgcacatgttcatcctggcgcacgtgcactccaaacgcatcatggcgctcgat
aaaaaccggcgccaggccaccagcatgaaaggcgccatcacgctgaccatcctgttaggg
gttttcatcatttgctggggtccattcttcctgcatctgatcctaatcctgacgtgtcca
acaaacccttattgcaagtgctacttcagccatttcaacctcttcttaatcctcattata
tgcaactctctcatagaccctttgatttacgcgtatcggagtcaagaactgcgaaagacg
cttaaggaaatagttttgtgctcttggtgctttgttatttatggtgctgatgctgccgcc
tcgccccggttgcagccggtcggtttctccgcagcctctgattggccagcgcctgcctgg
ctcagtgacgtcaccggacatgtgttaaatcagcatcgtctgggctttaaaaggccggtc
cgagctgtgcgagttttccgccggcaacttgcaggaggagacagagaacagcacacagat
acacacacacacatacacatacacacactcacacacacacacacacacaccctgaggatg
agagagattgtccacatccaagccggccagtgcggcaaccagattggagccaagttctgg
gaggtgatcagtgatgaacatggcatcgaccccactggaaactacgtgggtgactcagac
ctccagctggagaggatcagcgtttactacaatgaagcttcctcctccaaatatgttccc
agagccatcctggtggatctggagccaggcaccatggatagtgtacgatctggagccttt
ggccatctcttcagacctgataacttcatttttggtcagagtggagcaggcaacaactgg
gctaaaggccactacacagaaggagcagagctagtggactctgtcctggacgtggtgcgg
aaggaatgcgagaactgcgactgcctccaaggtttccagctcacccactcactcggaggg
ggcacgggctcgggcatgggcacgctgctgatcagcaaagtgagagaagaatatcctgac
cgcatcatgaacaccttcagcgtggtcccttcccctaaagtgtccgacacagtggtggag
ccctacaacgccacgctttccatccaccagctggttgagaacacagatgagacgtactgc
attgacaacgaagccctgtacgacatttgcttccgcacactcaagctggcaacgcccact
tacggcgacctcaaccacctggtctcggctaccatgagtggagtcacgacctcgctgcgc
ttcccaggccagctgaacgctgacctgcgcaagctggctgtcaacatggtacccttccct
cgcctgcacttcttcatgcccggattcgctcctttgacagcacgtggaagccaacagtac
cgcgctcttactgtccctgagctcacacagcagatgtttgacgccaaaaacatgatggct
gcgtgcgatccacgtcacggccgctatctcactgtggccaccgtcttccgaggacgcatg
tccatgaaggaagtggatgagcagatgctggccatccaaagcaagaacagcagctatttt
gtcgaatggatccccaacaacgtgaaggttgctgtgtgcgacattccaccccgggggctc
aagatgtcctccacgttcatcggcaacagcacggccatccaggagctcttcaagcgcatc
tccgagcagttcacagccatgttcagacgtaaggctttcttgcactggtacactggcgaa
ggcatggatgagatggagttcaccgaggctgaaagcaacatgaacgacctggtgtctgag
taccagcagtaccaggacgccacggctgaggaagagggagagatgtatgaggatgacgag
gaggagtcagaggcccagattcaaaagtaa
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