Ictalurus punctatus (channel catfish): 108264244
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Entry
108264244 CDS
T04658
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108264244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108264244
Spliceosome [BR:
ipu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108264244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108264244
NCBI-ProteinID:
XP_017321083
Ensembl:
ENSIPUG00000000171
UniProt:
A0A2D0QRJ5
LinkDB
All DBs
Position
1:complement(2893419..2898323)
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AA seq
510 aa
AA seq
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MSLADELLADLEEAGEEGEDGLYPVGEEDQIVGETVNRVGHGGLEDIPEEMETDFSSTEC
VTSIAKLRNSKSFAEIMDKIAQYVGNPRKNTDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNTLDYIRTVKELGNNLDKCKNNETLQQILTNATIMVV
SVTASTTQGTLLAEDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARQVSAKCALAARVDSFHESTDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPL
DASRTKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEGEAKA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagatgagctcttggctgatttggaggaagctggagaggaaggagaggac
ggactgtacccggttggggaagaagaccagattgttggagaaactgtaaacagagtggga
catggaggactggaggacattccagaggagatggagacggacttcagcagtacggagtgt
gtgacctctatagcaaaactgcgcaacagtaaatcatttgctgagatcatggataagatt
gcgcagtacgtcgggaatccacgcaaaaacacagacgtttccgggccggtggaggccgat
cctgagtatcgtctcatcgtcgccgctaacaacctgacggtggagattgataacgaactg
aatattattcataagtttgtgcgtgataaatactcgaagagattcccggagctggagtcg
ctggtgccgaacacgctggattacataaggactgtcaaggagctggggaacaacctggac
aagtgtaagaacaatgaaacgctacagcagattctgaccaacgccaccatcatggtggtc
agtgttaccgcctccaccacacagggtacgctcctggcagaggacgagctgcagcgactg
gaggaggcgtgcgacatggcgctcgagctcaaccaatcgaaacacaggatctacgaatac
gtcgagtcgaggatgtccttcatcgctcctaatctgtcgatcatcgtcggcgcctcgaca
gctgctaagatcatgggaatcgctggcggcctgacgaatctgtcaaagatgccggcgtgt
aacttaatgctgctgggagcgcagaggagaacgctgtccggattcagcagcacgtcactg
ctccctcacacaggctacatctaccactgtgacgtggtgcagtccctccctccggatctg
aggaggaaggcggcacgtcaagtctccgccaagtgcgcgcttgcggcccgtgtggacagt
tttcacgagagtacagatggcaaggtcggttatgaactgaaggaggagattgagcgtaaa
tttgataaatggcaggagccgccgcccgtcaaacaggtgaagcccctccccgccccgctc
gatgcttcaaggacgaagagaggaggcaggaggtatcgtaagatgaaggagcgtttggga
ctcacagagatcagaaaacacgcgaacagaatgaccttcgctgagatcgaagatgacgcg
tatcaggaggatctgggcttcagcttggggcagctgggtaaatcgggcagcggcagggtg
agacaggcgcaggtcaacgacgccaccaaagctcgcatctccaaatccctgcagcggacg
ttgcagaagcagagcatgacgtacggagggaagtccaccgtcagagaccgatcttcagga
acgagctccagtgtggcattcactccattacagggtttggagatcgtcaatccgcaggct
gcagagaagaaggtggccgaagccaaccagaaatatttctccaacatggccgagttcctc
aaggtcaagaaagaaggagaagccaaagcgtga
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