Ictalurus punctatus (channel catfish): 108264256
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Entry
108264256 CDS
T04658
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108264256
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108264256
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
IQ
MYO6_lever
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
108264256
NCBI-ProteinID:
XP_017321088
Ensembl:
ENSIPUG00000000430
UniProt:
A0A2D0QRK1
LinkDB
All DBs
Position
4:complement(18934668..19379344)
Genome browser
AA seq
1252 aa
AA seq
DB search
MQKAMRLNDGHITYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFTLLQNMLFYFESESSS
RPSGLYLLEGCVCDRSPSPKPSLSAKECLEKQYYFTISFNHENQKALELRTEDVKDCDEW
VAAITHASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAG
LLKDNEKIQSNPTIAPSEDDSEIKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYESKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLEYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVISLIDCTLFEDPESTDDEPKSDK
NSQDMEHLDFKIVVEPKDSQAFTIILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLIAIYKRPISAIPARSLELFFASSQNTKLIYGEPPKSPRAS
RKFSSPPPLALGKTSSPNRRRKLSLNIPIITGGKALDLAALTCSSNGYASMYSAITPFSK
TTLDINKLYVSSPITSKISDEAEGRSERAEEQQDISVREESDSEQIQSDEADAESSPTKS
PTTPKTVKCKTSSDFSLFSYNNGMMMSSCREIDNNRSALSAASAFAIATAGANEGTPTKE
KYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFETNTELKMNVIC
FLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQIALEDVVQMAVGGKAEPFENHSALE
IAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMTTTKHFNDVSNLIASEILRCE
DVNTRVAVMEKWVAVADICRCLHNYNAVLEVTSSLNRSAIFRLKKTWLKVSKQTKTVIDK
LQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSKMRMI
SHIIREIRQFQQTSYKIDHQPKAAQYLLDSSNVLDEESMYEASLRIEPKVPN
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcaatgcgactcaatgatggccacatcacctacctaggtcttttggcaaaa
aaggacggcacgaggcggggctgcctaagtaagaagagctcagacaacacgaaatggcac
acgaagtggtttacgctgctccaaaacatgctgttttatttcgagagtgagtcgagctcg
cggccctcgggattgtacctgttggagggctgcgtgtgcgaccggtcgccatcgcctaag
ccatcgctctccgccaaggagtgcttagaaaaacagtattatttcacaatcagcttcaac
catgaaaatcagaaagctcttgagcttcgcactgaagatgtgaaggactgcgatgaatgg
gtagcagcaataacacatgccagctacagaaacctggccacagagcatgagactttaatg
cagaagtatctccatctgcttcaaatcgtggagacagagaaaacagttgcaaagcaactt
cgacaacagatagaagatggggagattgaaattgagcgcttaaaatctgagattgctgga
ctgcttaaagacaacgagaagatccagtcaaaccccaccattgcccccagtgaagatgac
tctgaaattaagaaaatcaagaaggtacagagtttcttgcgtggttggatgtgtcggagg
aaatggaagaccattatccaggattacattcgctcaccgcatgccgaaagcatgaggaag
cgaaaccaggtggtatttagcatgctggaagccgaggctgagtatgtccaacagctccac
atccttgtgaacaatttccttcgaccactccgtatggctgccagttccaagaagccaccc
atcactcatgatgacgtcagcagcatttttctcaacagtgaaaccatcatgtttttacac
cagatattctatcaaggcctgaaagcacgtatagcaagctggccaacattagtcttggct
gacctctttgacattctcctgcccatgctgaacatctaccaggagtttgttcgtaatcac
cagtacagcctgcagatcctggcacactgcaaacagaaccgtgattttgacaagctgctg
aagcagtatgagtccaagcctgactgtgaggagcgcactctggagacctttctcacatat
cctatgttccagataccccgctacattttgactctccatgagctgttggcacacacgcct
catgaacatgtggagaggaatagtttggaatatgctaagtccaagctggaggagctttcc
agaatcatgcacgatgaagtaagtgaaacagagaacatcaggaagaacctggccattgag
cgtatgatcgtggagggctgtgagattctcctggatactagccagacttttgtcagacaa
ggatcacttatccaggtacccatgagtgagaaagggaagatcacccgtggccgtttgggc
tccttgtctctgaagaaagagggtgagagacagtgttttcttttctctaaacacctcatc
atctgtacaagaggctctggggggaagctgcaccttaccaagaatggagtaatttcgctt
attgactgcacattattcgaggacccagaaagcacggatgatgagccaaaatcagacaag
aatagccaagatatggagcacctggactttaaaatagtggtggagcctaaagacagccag
gccttcaccatcatcctagttgcctcctcaaggcaagagaagtcagcctggaccagtgac
ataagccagtgcattgacaacattcgttgcaatggccttatgatgaatgcttttgaggac
aactcaaaagtcactgtgccacagatgatcaaatctgatgccagtctttactgcgatgat
gtggacatccgcttcagtaagatgatgaactcatgcaaagtgttgcagatccgctatgcc
agtgtggagcggttattggagcggctgactgacctgcgcttcctgtctattgactttctc
aacacctttttgcactcataccgcgtctttaccactgcagatgttgtactcgacaagctc
attgccatctacaagaggcccatcagtgccatcccagctcgctctttagaactgttcttc
gccagcagccagaatactaagctgatatatggtgaaccacccaagtcaccccgtgccagc
cgtaagttctcctcacctcctccactggcccttggcaagacttcttctccaaacaggcgc
cgcaagctctcactcaacattcccatcatcacaggtggcaaggcactggaccttgctgca
cttacttgttcctccaatggatatgccagcatgtactcagccattacacctttcagcaag
accacactggatatcaacaagctctatgtgtccagccctatcaccagcaagatcagtgat
gaggctgagggcagatctgagcgtgcagaggagcaacaggatatttcagtgagggaagaa
agtgacagtgagcagatccagagtgatgaggcagatgcagagtcttcacccacaaaatca
cctacaacgccaaaaactgtcaaatgcaaaacctcttcagatttctccctgttctcatac
aataatggcatgatgatgtcatcttgccgagaaatagacaacaaccgcagtgcactttcg
gcagcatctgcttttgctattgccacagctggtgccaatgagggcacgccaacgaaggag
aagtaccgccgcatgtcgctggctagtacaggattccccacagaccagaggaatggagat
aaggagtttgtaattcgccgtgcagcaactaaccgagtacttaatgtcctgaggcactgg
gtgtccaaacattcacaggactttgagaccaacacagaattaaaaatgaatgtgatctgc
ttcttggaggaagttatgcatgaccctgagctgctgactcaggaaagaaaagcagcagcc
aacatcataaggacgcttacacaggaggaccctggtgacaatcagattgctctggaagat
gtggtacagatggctgttggtgggaaggcagaaccctttgaaaaccactcagctttggag
attgcagagcagctcactctgctggaccacctggttttcaaagtcatcccatatgaggag
ttctttggtcaaggctggatgaagaatgacaaaaatgaaaagacaccctacatcatgacc
acgactaagcacttcaatgatgtaagcaacctgattgcatcggagatcctgcgctgcgaa
gacgtgaacacacgggtggccgtgatggagaagtgggtggcagtagctgacatctgccgc
tgtctccataactataacgctgtgctggaggtaacctcatccctcaaccgcagcgccatt
ttccgcctcaagaagacctggctcaaagtttcaaaacagacgaaaacagttattgacaag
ctgcagaagttggtctcatctgagggaaggttcaagaacctaagagaagccttaaaaaat
tgtgaccctccatgtgtgccatacttggggatgtacctcacagacctggcattcattgag
gagggtacaccaaactacacagaagacaacctggttaacttttccaagatgagaatgatc
tcccatatcatcagagaaatacgtcaatttcagcaaacatcatacaagattgatcatcag
ccaaaggcagcccagtatttgctagacagtagcaacgtgttggatgaagaaagcatgtac
gaagcctcgctcagaattgagcccaaagtgcccaactga
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