KEGG   Ictalurus punctatus (channel catfish): 108264290
Entry
108264290         CDS       T04658                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108264290
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108264290
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    108264290
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     108264290
SSDB
Motif
Pfam: AAA_33 SPRY SAP AAA_17 SRP54
Other DBs
NCBI-GeneID: 108264290
NCBI-ProteinID: XP_017321164
Ensembl: ENSIPUG00000011639
UniProt: A0A2D0QTV7
LinkDB
Position
4:complement(6102922..6122676)
AA seq 795 aa
MDIDVKRLKVNELKEELQKRGLDIRGLKADLVDRLKAALDSEAAAQDAQEVTPGDGQQTE
AVAGDEEPGYEDVSHQGRQEDEGIQIKDETKVVPDVDHDVNRAEIVEEHLVKPETEMLPV
FTEEQNALPGEVKEEDDVKPEQQQDPGAASELEEAQQASRYTSHQDNQAPHGRKRHHDDA
PGYSYYEHREDKRSRSPQPPAEEDEEDFDDTLVAIDTYNCDLHFKVARDRYSGYPLTIEG
FAYLWSGARASYGVNKGRVCYEMRITEEISVKHLPSSEPDPHVVRVGWSLDSCSTQLGEE
PFSYGYGGTGKKSSSCKFEDYGQKFGENDVVGCYIDFDSSHEVEISFSKNGKWLDVAFRV
RKEELSGRALFPHILVKNCAVEFNFGQKEEPFFPSPEGYEFIQTIAVEDRIRGTVGPATK
ADCEILMMVGLPACGKTTWAAKHAETNPEKKYNILGTNAIMEKMKVMGLRRQRNYAGRWD
ILIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDL
KERTLKQTDVEGKDVPDHAVLEMKANFVLPESGDFLDEVTFVELQRDEAEKMVKQYNEEG
RQAAPPPEKRYDNRQTGYRGQSSSFQRYDNRGGPRGGYQIRGGSGGGYRPGFKRGGYNQN
GWGGNYRDNSSRGGYNRNQSYGGSYNSNHQGSYSKDGYNQSYNQGYNQDYNQSNYNQGNY
NQGSYNYGNYSQYPGYGQGYSDNQASGYNQQQSYNQQYQQYAQQWQQYYQNQSQWNQYYS
QYGNYSGQQGNSQGQ
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggacattgatgtgaaaaggctaaaagtgaacgagttgaaggaggagctgcagaagagg
ggattagacatccgtggcctgaaggcggacctggtggacagactgaaggctgctttagat
agcgaagcagcagcacaggatgcacaggaagtcacacctggtgatggacagcaaaccgaa
gcagttgctggtgacgaggagcctggctatgaagacgtgtctcaccagggacggcaggaa
gacgagggcattcagatcaaagacgagacaaaagtcgtccctgacgtagatcacgatgtg
aacagagcggagattgtcgaggagcatctagtcaaacctgaaacagagatgctgcctgtc
ttcacagaagagcaaaatgcactaccaggtgaggtgaaggaggaggatgacgtaaagcca
gaacagcagcaagaccctggagcagccagcgagttggaagaggcccagcaggcttcacgt
tacacatcccatcaggacaaccaggcacctcacggccgcaaaaggcaccacgacgatgcc
cccggatatagttactacgagcatcgagaggacaagaggtcccgctcacctcaacctcca
gctgaagaagatgaggaggattttgatgacacgctggtggccattgatacctataattgc
gatctgcacttcaaagttgcccgagaccgctacagtggctaccctcttaccatcgaaggc
tttgcttacctgtggtccggcgcacgcgcctcatacggtgtgaacaagggccgtgtctgc
tacgagatgaggataacagaagagatctcagtcaaacatcttcccagtagtgagcctgac
ccacatgtagtgcgcgtgggctggtctctggattcctgcagcacacagcttggtgaagag
ccattctcttacggatacggcggaacaggaaaaaaatcctccagctgcaaatttgaagat
tacgggcagaaatttggcgaaaacgacgtcgtcggatgctatattgactttgacagcagt
catgaagtggagatttcattctcgaagaacgggaagtggttggatgtagcgttccgggtc
agaaaggaggagctgtctggtcgagcgcttttccctcatatcctggtgaagaactgtgct
gtggagtttaactttggccaaaaggaggagcctttcttcccttctccagagggatatgag
ttcatccagactattgcagtggaggacaggatcagaggcactgtgggtcctgcaaccaag
gctgactgtgagatcttgatgatggttggtctgcccgcgtgtggcaaaaccacttgggca
gccaagcatgctgagacgaaccccgagaagaaatacaacatactcggcaccaacgccatt
atggagaagatgaaggtgatgggtctgcggcgtcagaggaattacgcaggtcgctgggac
attctcatccagcaagccacgcagtgtctgaaccgactcatccagatcgccgcccgcaag
aaacgcaactacattctggaccagacaaatgtatatggatcagcccagagacgaaaaatg
cgtccctttgaagggtttcaacgcaaggctattgtaatttgtcccacggacgaggactta
aaagagcgaacgttaaagcaaactgatgtggaagggaaggatgtgcccgatcatgctgtt
ttagaaatgaaagctaactttgtgctgccggagtctggagatttcctggacgaggtgacc
ttcgttgagctgcagagagacgaagcagaaaagatggtgaagcagtacaacgaggagggc
cggcaggctgcgcctccacctgaaaaacgctacgataaccggcagacgggttaccgcggc
caaagcagcagcttccagcgttatgacaaccgtggaggtccacgaggaggctatcagatc
cgtggcggctctggaggaggatacagaccaggttttaaacgtggaggctacaaccagaac
ggctggggtgggaattacagagacaacagctcgagaggtggctacaaccgtaaccagagc
tatggaggaagctataacagcaaccaccaaggttcctatagtaaggatggatacaaccag
agctacaaccaaggatataaccaagactacaaccagagcaactataaccaaggcaactac
aaccaaggaagctacaactatgggaattacagccagtatcctgggtatggacaaggctac
agtgataatcaagcctctgggtacaaccagcaacagagctacaaccagcagtaccagcag
tatgcccagcagtggcaacagtactaccagaaccagagccagtggaaccagtactacagc
cagtatggcaactactctgggcaacagggcaacagccagggccagtga

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