Ictalurus punctatus (channel catfish): 108264303
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Entry
108264303 CDS
T04658
Name
(RefSeq) 5'-3' exonuclease PLD3
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00564
Glycerophospholipid metabolism
ipu00565
Ether lipid metabolism
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108264303
00565 Ether lipid metabolism
108264303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108264303
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
108264303
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108264303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7272
Motif
Other DBs
NCBI-GeneID:
108264303
NCBI-ProteinID:
XP_017321207
Ensembl:
ENSIPUG00000001601
UniProt:
W5UD05
LinkDB
All DBs
Position
4:22884590..22921759
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AA seq
482 aa
AA seq
DB search
MNSDVAYEKMADVESSKRESLLKLQKYSRCILILTLLTAVLLMMFSIQTLLIPSILTSGP
KTNPPIAHPCTDTCRLVLVESIPVGLEFNSSVGNPSIYQAWQSLLSEAQSSLDIASFYWT
LTNEDTHTHEPTANQGEEIMQELVELSGKISVRIAVNTPQKRQPQRDIQLLINAGADVRD
VNMRDLTTGVLHTKFWVVDKKHIYIGSANMDWRSLTQVKELGAVVYDCKCLADDLGKIFE
AYWFLGESKTIPAPWPSQYATAFNKDTPMQLPINGTDSRVYLSSSPPSLCAEGRTSDLQA
ILSVINDAQRFVYIAVMDYLPAVQFSFPKRYWADIDTELRRVAFERKIHVHLLISCWNNT
SEDMFPFLRSLASVQDSKSNLDIQVKIFIVPSSPSQKEIPFARVNHNKYMVTDRVAYIGT
SNWSGDYFVNTAGSALVVNQTSTSSSESTVREQLQAVFDRDWDSPYSTPLNHNSDLKQIC
EI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgatgttgcatatgaaaagatggctgatgtggagtcgagtaaaagagagagt
cttctgaaactccaaaagtattccaggtgtattctgatcctcacccttctcactgctgtg
ctgctcatgatgtttagcattcaaacacttctaattccctcaatcttaacatctggcccg
aagacaaatcctcccatcgcacacccctgcactgatacctgcagactggtactggtggag
agcatcccagtgggattggaattcaactcgtctgttggtaatccatccatctatcaggca
tggcagagtctcttgtcagaggcgcagagcagtctggacattgcctcgttctactggacc
ctcactaacgaggacacacacacacatgagccaacggccaatcagggtgaggagatcatg
caggaacttgtagagctttctgggaaaatctctgtgcgcatcgctgtgaacactcctcag
aaaagacagccacagcgtgacatccagctgcttattaatgctggtgccgacgtgagggat
gtaaacatgcgagatttaactactggtgtgctgcacactaagttctgggtggtcgataag
aagcacatttacatcggtagtgccaacatggactggagatccttaactcaggtgaaggag
ctcggtgctgtggtatatgactgtaagtgccttgctgatgacctcgggaaaatatttgaa
gcctattggttccttggtgagagcaagacaatacctgcaccctggcccagccaatacgct
acagcctttaacaaagacacaccaatgcagctgccaatcaacgggacagactctagagtt
tacctgtcgagttctcctccatctttgtgtgctgagggcagaacttcagatcttcaggct
attttaagtgttattaacgatgcacagcggtttgtttacattgctgtgatggactacctg
cccgctgtgcagttctcatttcctaaaagatactgggctgatattgacactgaactgagg
cgtgtggcattcgagaggaagattcatgtacatttgctgatcagttgctggaacaacacc
tctgaagacatgttcccatttttacgctcgcttgcatctgtacaggattcaaagagtaac
ctcgacattcaggtgaaaatcttcatcgttcccagcagccctagtcaaaaggaaattccc
tttgctcgagtgaaccataacaagtacatggtgacagacagagttgcctatataggaacg
tcaaactggtctggcgattactttgtgaacacagcaggctcagcgttagtggtgaatcag
acttcgacctcatcatcagaatccacagtgagagaacagctgcaggctgtgtttgacaga
gattgggattctccctacagcactccactcaaccacaacagcgacctcaaacagatctgt
gaaatataa
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