Ictalurus punctatus (channel catfish): 108264324
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Entry
108264324 CDS
T04658
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108264324
04812 Cytoskeleton proteins [BR:
ipu04812
]
108264324
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
108264324
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
108264324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
108264324
NCBI-ProteinID:
XP_053534136
UniProt:
A0A9F7TII2
LinkDB
All DBs
Position
4:complement(31211762..31258315)
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AA seq
791 aa
AA seq
DB search
MKAHKQQERDTKGQFLTPTVNSYKMHSAPVKSLLSEKLVPRPLDIRFPTDLTKTNLVVFR
ANPSRQDCKLGMYGKTLRTPASVKEFTGPEIALTPPPVTVKRGKAQRVNHNAELTHTHSK
APVLLNTLGDPVAPSDRSAPGFPVYLCCGNDYPFILDRLDLDRRDLIECPNLDGMNKLRV
LNLQHNRLSHLPHLAHLRHLVFLDLYDNRLIDMSAASPLSSLRVLVLGKNRIQRICGLDT
LTNLDVLDLHENQISRIENVSHLAELRVLNLAGNYISRVENLQGLESLIELDLRLNHISS
VTEVDRLPCLQRLFLSSNSISSFDELACLGDSCSLNELTLDGNPVAQESCYKQTVLRCVL
PLRLLDMKRITEEDRRVANLLARKEDEKKRESHKQAAHKEKRRLAIRNAAQQWEDSRSFL
ELPAQNGAKEELSPENSPAHSPGQTNGITQEPSPDDLRRDRGSPLTVPERPAGGSDGKAR
SSSRPNSPRDPRLQEAGGASVQSLSLSESHVAELDGETVRLFGPGALETLERGWGVQTAS
TVTTIAFRYIQFDSIVPTLPRIRLKFPNLTHLIFMETNITRLLQLAALAQVKRLEQVTID
PEGNPVVSLALWRAFLIYRLNHLNLQRINGTEVTLNDVMAAERLFGTLGHVASTETPHCR
LLLLLEESRKRQLQFLLEGRVRRFGLSPEELRENGKLLGESMSRALFNYHSKDSSSESPE
ESSSEVSERSSVVDQYLRGLVHTASSTGLKREALHKLWPTMFVEMVRDCVLETRDTPAYT
RACLDTLSDTK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcataaacagcaggaacgcgacaccaaaggacaatttcttacacccacggta
aacagctacaagatgcattcagcaccggtgaaatccctgctctcagagaaactcgtaccc
aggcctcttgacatacggtttccgacagacctcacgaaaaccaacctggtcgttttcaga
gccaatccatcgaggcaagactgcaagttgggcatgtacggtaaaaccctgcgtacccca
gcgtccgtgaaagagttcacaggaccggagattgctctaacgccccctccagtgaccgtc
aagagggggaaagcacagcgagtcaaccacaacgcagagctcacccacacacacagcaag
gcccctgtcctcttaaacacactcggtgatcctgtggcaccgagtgacagatctgctcca
ggttttcccgtctacctctgctgtgggaatgattatcctttcatcctggacagacttgac
cttgaccgtcgtgacttgattgaatgcccaaacctggacgggatgaataagctccgcgtc
ctcaacctgcagcacaaccggctctctcacctcccacacctggctcacctgcgacacctt
gtcttcctcgatctctacgacaaccgtttgatcgacatgtcggccgcatcacctctcagc
tcccttcgcgtgctcgtgctcggcaagaacagaattcagaggatatgtggtctggacacc
ctgacaaatctcgatgtgctggacttacatgaaaaccagatcagtaggatcgagaacgtt
tctcacctagcagaactcagagttctgaacttggcaggaaactacatctccagggtggag
aacctgcagggcctggaatctctgatcgagctcgacctcagactcaaccacatctcctct
gtaacggaggtggaccgactgccctgtctccagcgtctcttcctcagctctaacagcatc
agcagttttgatgagctggcctgtctgggagactcgtgctctctgaatgagctcaccctg
gatgggaaccctgtagctcaggagtcatgctacaaacagaccgtgctgcgctgcgtgctt
ccactccggctgctggacatgaagcgcatcacagaggaggacagacgcgtggcaaatctt
ttagcgcgaaaggaggatgagaagaaacgcgagagccacaaacaagccgctcacaaggag
aagcggcgactggccatccgtaatgcagcgcagcagtgggaggactccaggagctttctc
gagcttccagcacagaacggcgccaaggaagagctgagcccagagaacagccccgcccac
agcccaggacagaccaatgggatcactcaggagccgtcacccgatgacctcaggcgagat
agagggagtcctctcactgttcctgagcgtccagcagggggcagtgatggtaaagcgcgc
tctagcagccgccccaacagcccccgagaccccagactccaggaggcagggggcgccagc
gtgcagagtctgtctctgtctgagagccacgtggccgagctggacggcgagacggtgcgt
ctgttcggtccgggggctctggagactctagagagaggctggggggtgcagacagccagc
accgtcactaccatcgccttccgctatatccagttcgacagcatcgtgcccactctgcca
cgcattcgcctcaaattccccaacctcacgcacctgatctttatggagactaatataaca
cggctgctgcaattagcagctctagcgcaggtaaagaggctggagcaggtgaccatcgat
ccggaaggaaaccccgtagtgagcctggctctgtggcgagccttcctcatctacagactc
aaccacctgaacctgcagagaatcaacggcacggaggtgacactgaacgatgtcatggcg
gccgagcgcctttttgggaccctgggtcacgtggcttcgacggaaacgccacactgtcga
ctgcttctgctgctggaggagtctaggaagaggcagctgcagttcttgctggagggcaga
gttcgcaggttcggtttgagccctgaagagctgagggagaacgggaagctgttgggggag
agcatgagccgcgcactctttaactaccacagcaaggattccagctctgagagtccagag
gagagcagcagcgaggtgtcggagcgcagctccgtggtcgatcagtacctgcgaggactc
gtgcacacggcgtccagcaccggcttgaagagagaagcgctgcacaagctctggcccacc
atgtttgtagagatggtgagggactgcgtgctcgagacaagggacacaccagcgtacacg
cgcgcctgcctcgacacgctctccgacaccaaatga
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integrated database retrieval system
