Ictalurus punctatus (channel catfish): 108264358
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Entry
108264358 CDS
T04658
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108264358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108264358
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108264358
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_11
CDC45
RRM_occluded
Pro_N
Motif
Other DBs
NCBI-GeneID:
108264358
NCBI-ProteinID:
XP_017321281
UniProt:
A0A2D0QU75
LinkDB
All DBs
Position
4:complement(28278945..28302119)
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AA seq
774 aa
AA seq
DB search
MAALTLFVQNLPASASSEHLEEIFSEIGPVKRCFVVRDKGSETCRGFGYVTYCMAEDAQR
ALREMKYYEDKKIIVIQAKKKLYEKKQGKKKKAEVKTERAEVKTESPEVKTESPEEPSEV
KSQPKSQGMRKNKMKARLIIRNLSFKCSEADLKEVFSKYGTVLEAKIPLKPDGKKRGFAF
VQFKNIQEAGKALKATNLKEIKDRQVAVDWAVSKDKYVANQLSSASGGKKVTEADDEDVK
PVEKQSKSQPEESSHSESEAGSSSDDDDDDDDDDDEEDHSKDSEDEEHNDSESLEADSDA
SDDEDTDEDDDKEENAKKKKPKKLLPSDVNEGRTIFIRNLSFNSEEEEIEEVLLQFGELA
YVRIVVHPETGHSKGYAFAQFKTKEAAEKCLAAAAQTESETGGVWVDGRKLSIVLAVTRE
DASKLKNKKVKTHTGSRNLYLAREGLIRAGTKAAEGVSEFDMAKRERLAELRRAKLKDVN
VFVSQTRLCIQNLPGSVDNKGLRKLCMLAAGGGKGVRIKECRVMYDRKPVRGEPMGRSLG
YGFVEFQEHEHALQALRHLNNNPKIFKANKRPIVEFSLEDKRKLQLKAWREQKSKMTSAA
YPGAGKKQVSRFGTLEGTSTQPQQKSPKKPSAAVQQSEEFQKGGKKIQGVVSSHYSGFRT
TPEVEHVELGDGKKRQKILPMPSRIGPKIRKRDKGKQNAQVRKVKTIPSRKERKGVLSME
KPSPNKKQNAKPAKRKFQNREHDHFDRLVEQYKKKLTGTSNSNESLVKKSKWFS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcagcactgactttatttgtgcagaatttacctgcatcagcgtccagtgagcacctg
gaggaaatcttctccgaaataggaccggtgaagcgctgctttgtggtcagagataaaggc
tcagagacatgccgtggtttcggctacgtcacttactgcatggcagaagacgcccagcga
gctctcagagaaatgaagtactacgaagataaaaaaataatagtgattcaggcaaagaag
aaactctatgaaaagaagcagggaaagaagaaaaaagccgaggtaaaaacagagagagct
gaggtaaaaacagagagtcctgaggtaaaaacagagagtcctgaggaaccatcagaggtg
aaaagccagccgaagtcacaaggcatgaggaagaacaagatgaaggccaggcttattatc
cgaaatctcagtttcaaatgctctgaggctgatcttaaggaagtcttttcaaagtatggg
acagtgctggaagctaagatccctctaaaaccagatggaaagaaacgaggatttgccttc
gtccagtttaaaaacatacaggaagcaggaaaagcactcaaagcaaccaacctgaaagaa
attaaagacaggcaggttgctgtagactgggccgtgtctaaagacaagtacgtggctaat
cagctcagctcggcctcgggaggtaaaaaagtgacggaggctgatgatgaggatgtcaag
cctgtagagaaacagtctaaatcacagccagaggagagctctcacagtgaatctgaggca
ggctcatcatctgatgatgatgatgatgatgatgatgatgatgatgaagaggatcacagc
aaagacagcgaggatgaagagcataatgactctgagtctctggaagcagacagtgatgca
tcagatgacgaggatacggatgaagatgatgataaggaggaaaatgccaagaagaagaaa
ccgaagaaacttctcccttcagacgtgaatgagggtagaacgatatttataagaaacctg
tcttttaactcggaggaagaggaaatagaggaagttcttctgcagtttggtgaactcgca
tatgtgcggattgtggtgcatcctgaaacgggacactcgaaaggctatgcttttgcgcag
ttcaaaacaaaagaggcagcagagaaatgtctagcagcagcagcacagacggaatctgag
actggcggtgtgtgggtggatgggaggaagctgagcattgtgttggcagtgaccagagag
gacgcttccaaactgaagaacaagaaagtgaaaactcacacaggctccaggaacctctac
cttgccagagagggcttgatccgtgctggaaccaaagcagcagaaggagtttctgaattt
gatatggccaagagggagaggcttgcagagctgaggcgggcaaagctgaaggatgtgaac
gtgtttgtctctcaaacccggctgtgtattcaaaaccttcccggaagtgtggacaacaaa
ggtctccgcaaactctgcatgcttgctgcagggggaggaaagggtgtccgtatcaaggag
tgccgagttatgtacgacaggaagccggtgcgtggtgagccgatgggtcgctcactaggt
tacggctttgtggagtttcaggaacatgaacacgccctccaagccctgcgtcacctcaac
aacaatcctaaaatcttcaaggccaacaagaggcccattgtggagttttcgctggaggat
aagaggaagttacaattgaaggcttggagggagcagaagagcaaaatgacatctgcggct
taccccggggcaggaaagaaacaagtgagcagatttggaactctggaaggcacaagtacg
cagcctcagcagaaatctcctaaaaagccctcagccgcagttcagcagtcagaggaattt
cagaaaggaggcaagaagatccagggagttgtaagcagccattactcaggtttcagaacc
acaccagaagtagagcacgtcgagctgggtgacggcaaaaaacggcagaagattcttccc
atgccttctcgtatcgggccaaagatcaggaaacgggataaaggtaaacagaatgcccag
gttaggaaagtgaagacgatccccagcaggaaggagagaaagggagtactctcgatggag
aaacccagtccaaataagaaacagaatgccaaaccagcgaagaggaagttccagaacaga
gagcacgatcactttgaccgtctggtcgaacaatacaagaagaaactcacaggcacttcg
aactctaacgaatccctcgtcaagaagagcaagtggttcagttga
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