Ictalurus punctatus (channel catfish): 108264372
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Entry
108264372 CDS
T04658
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108264372 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108264372 (bicra)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
108264372 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
108264372
NCBI-ProteinID:
XP_017321323
UniProt:
A0A2D0QS86
LinkDB
All DBs
Position
4:complement(19819044..19835651)
Genome browser
AA seq
1820 aa
AA seq
DB search
MDDEDGRCLLDVICDPQALNDFLHGSETQLDTDDLLDGSSDPSSSFFSSTGEHVPEIQPP
SQLSTSEPSGLPRVSVDLDFLEDDDILGASPEEGDNEGNGVGSNHEPCDILQQSLAEANI
TEQSLQEAEGELDLSSFGLTSLTQVVQPLPDAGMPGVGIAGTTQIFPGQGTPTTPSSAAT
DMLGSVLAHQGMQLQPQVMNKAINVQPFMQQVGLGNVTLQPISSLQTLPNGSQSGHLGIG
QIQVVGQSTVMTINPSGQHILTKTMGGYPLHQPGLDTTSAGAQAGLGGSVLSSGGGLLIQ
GGKATLGSPSLNGPAICVSSTNTNSSGTTMAAPSGILGFARGPLNTGTQSQTQNQVMQNV
IIQRTPTPIQPKPPQGSSIQPKSFKQQPQMPASHTLQNDANKALGVQQVPASTAQNVAFL
TGKPSSNVVLSTQTTTQGTQFSQALFKQHSNPTSGKPLSVHLLNQQGSIVIPSQAVLQGQ
NHQFLLPQLQTGGQILAQQTGGHIITSSGPGGQIIAANQILATNQNINLGQVLAPQGHPG
AAHILSGPIQLQPGQMGHPTLFQMPVSLAQSQNKAHSVTGHVQTVIQGMPIQSSLSIEGL
SPAVSLQPTLQQQAGGVTGNSSTGVAAIPQCQPSESITELGTSTEQASQSHPQPSILTVQ
TGPSVSATMLIPSSTSPSSTLTTSTTSVSTVGLASQVQHSPGKVLFTPPSSSIILSQEPV
QMFLQQDQQHQAGKEPPASVGVPASVIVTGGSSGSAPTAHDGPLTETRPGENVSPTLGPA
DMAALVNKVSSSAHQQQALKIQSASPSQSVATHSVTPTLSDSPQPSQASPLIQIQSPHPP
QSQPPSQPQAQPSSQSQAPSRACTPSSIPPLFIIHNSIGGSPQPSQAVAQAPQQQTQPQP
IQVQIPQVLPQPVVLQHEQLPTSSGSPKPPQAPSSQFHFVTPTVCATAGAVLKQQIPGLT
AEQQHHLQLINAQLQTMSSITQPSLQQKQLLEKLNQVQQNILLQAKQQLQPQGSQFSKLP
DQPTTPMVNTSASSTVSASVTSLLQQKSVFIKSSVSSSNDTQVFPGTSGPSGITVNQGKP
PLNLSQSVQAKPGVISAVGGLTLGKAGLQIQVLNSGLSQMTTLQPSATVQTQTSALKRPL
SVEPSKEARILEQLRKLQASVLHPDYSSPFHSFEDTLCRLLPYHVYQGMAPSSQDYRKVD
DEFENVSNQLLKRTQAMLDKYRHLLFEESRRLGPSAEMVMIDRMFIQEEKIALNQDRILA
KEKPEEFVASSCMVSRVADSGVRPAAVELSSIKTGPATVELSSVKSAVATAHVAGIPAPA
STLVTVAATANSVPVSFPPTKLVIKQGGGGALVSWSTSCTSMPASVVRPCAKATGLSSER
CFGPTSSSIHSADDDDDDDDDALPQRTSKPPIKTYEARQRIGLKLKIKQEAGFSKVVHNT
ALDPVHLQPQHTPLPQVPEPPSKTRPPVTQLSIVQRTSPSSSNSTCSITFSAATTHAGSG
TTTSSTAPPPSVSHGLSSSLSSCTSSAQVNGTLEHYEVSGAKLNPTSTSAPQLTTCRLPL
RKTYRKNISPHHRPGVPGGGNMGPIPPAAPASSPPVERTVIASVKLEQQGVCKPPHTLTD
PGSQGLASVEHEFYHGIKNAYQQQQQSSDKEDEEDGNTGDHMGRVMGQMSKNREWAVGTF
RMDQHAPGPPSLGETSWARDSSLPAKRSKSDSPDMDNASFSSGSPPLDNSLNEHLQCAID
SILNLQQGPPTRGAVDRVYAGNLTNQHQTHHRQGTASSSTSLYRHSVSSASSPSSSSISQ
HPQLGGRGQNGNLVSQTHSR
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgcttgctagatgtaatttgtgacccacaagctctcaat
gactttcttcatggatcagaaacacagctggacactgatgatcttttggatggctcaagt
gacccgtccagctcgttcttctccagtactggggagcatgttcctgaaatccaaccacca
tctcagctgtcgacaagtgagccatctgggcttccccgggtcagtgttgatttggacttt
ctagaagacgatgacatccttggggcctcgccggaagaaggagataatgaaggcaatggt
gttgggtcaaatcatgaaccttgtgatattctgcagcagagtctggcagaagccaatatc
acagagcagagccttcaagaagcagagggtgagcttgacctcagctcatttgggctaact
agtctgacacaggtggtccaaccgctaccggatgctggtatgccaggggtgggcattgca
ggaactacacaaatctttcctggccagggcacccctaccacaccttccagtgcagccacc
gacatgcttggctcagttctggcacatcaagggatgcagcttcagccccaggtcatgaac
aaagccatcaatgtccagccatttatgcagcaagttggacttggaaatgtgacccttcaa
cccatttcaagccttcagactctaccaaatggaagccagtctggacatctgggcattgga
cagattcaggttgtgggtcaatccactgtaatgactatcaatccatcagggcaacacatc
ctgaccaaaaccatgggcggctatcctctgcaccagcctggacttgataccacaagtgct
ggggcccaggccggtcttggaggttctgtgcttagctctggagggggactgttgattcag
ggaggcaaggccactctagggtctccatcattgaatggcccagctatttgtgtcagcagc
actaacaccaacagcagtggtaccacaatggctgctccaagtggtatactgggatttgct
cgtggtcctttaaatacaggaactcagtctcagactcaaaaccaagtcatgcagaatgtt
atcatccagcggacaccaactccaatacagcctaaacctccccaagggagcagcatccaa
cccaaatcattcaaacaacagccgcaaatgccagcctcacatacattgcaaaatgatgcc
aataaagctcttggggtgcagcaagtcccagcatctacagctcagaatgtagccttcctc
actggcaagccaagttcaaatgtagttctgagtacacagaccaccacacaggggacacaa
ttctcccaagccctgtttaagcaacatagcaatcctacatcaggcaagcctcttagtgtt
cacttgctaaatcagcagggtagcattgtcattccttcccaggctgtcttacaagggcag
aatcatcaattcctcttgcctcagcttcagactggaggtcaaatcctggcccagcaaact
ggcggacatattattaccagttccgggccaggtggacaaattatcgctgccaatcaaatc
ttggcaacaaatcaaaatataaatctagggcaggtattggcccctcaaggtcatcctggt
gctgcccacattctttctggacccatacagcttcaaccaggtcagatgggccaccccaca
ctgttccagatgcctgtttctctagcccagtcacagaataaagctcattcagttacagga
catgttcaaactgttatacaaggcatgcctatacagagttccttgtcaatagagggcctc
agcccagctgtcagtttgcagccaacccttcagcagcaggctggtggtgttactggaaac
agcagcactggagtagcagccattccccagtgccaaccaagtgagagcataactgaactg
ggtacctccactgagcaagcatcccaaagccatccccaaccctctatccttactgtccag
acaggtccttcagtttcagccactatgttgattccctcctctacatctccatcttccaca
ttaactacatctacaacctcggtgagcacagttggcttggcctcccaggtccagcatagt
ccaggaaaggtgttgttcactcctccaagctccagcattatccttagccaggagcctgtg
cagatgttcctgcagcaggatcagcagcatcaagcagggaaagagccacctgcctctgtg
ggtgtacctgcatctgttatcgtcaccggtggcagctctggttccgcccctacagcccat
gatggcccattaactgaaactcgcccaggggagaatgtgagtcctacccttggccctgct
gacatggcagcattggttaacaaggtttcatcatcagcacatcagcagcaagctttaaag
atccaaagcgcctcaccttctcagtctgtggccactcacagtgtgacgccgactctatca
gacagcccgcagccgtcccaggcttctccccttattcagatccagtcccctcaccctcca
cagtcccaacctccctctcagccccaggcacaaccatcatctcaatcccaggcaccttct
cgggcatgcacaccttcctctataccgccactttttataatacacaattcgataggtggt
tctccacaaccatctcaggcagttgcccaagctccacagcagcagacacagcctcagccg
attcaagtgcagattccacaggttcttcctcagcctgtggtcctccagcatgaacagttg
cccacctcttccggctccccaaagcctccccaggctccttcatcacagtttcattttgtg
acaccgacagtgtgtgccacggctggggcagtgttgaaacagcagataccaggcctgact
gccgaacagcagcaccacttacagctgattaatgctcaactacagacaatgtcatccatc
acccagccttcactgcaacagaagcagctactggaaaagctcaaccaggtacagcaaaac
atactacttcaggcaaaacaacaacttcagcctcagggcagtcagtttagcaaactgcct
gaccagcctacaaccccaatggtgaacacctcagccagcagcacagtcagtgcatctgtc
acatctctgttgcaacagaagtctgtgttcatcaagtcctcagtttcaagttcaaatgac
acccaggtatttcctggaacttcagggccaagtggaataacagttaatcaaggaaaaccc
cctctaaatctttctcagtctgttcaggcaaagcctggggttataagtgcagttggaggg
ctgacattaggtaaagcagggttacagattcaggttctgaacagtggactttcacagatg
actaccctacagccatcagctactgttcaaacccagacttcagctttaaaaaggccttta
agtgtggagccaagcaaagaagcacggatattagaacagctgaggaagcttcaggcttct
gtactgcatccagactacagctcacctttccactcttttgaggacacactctgccggctg
ttgccctaccacgtgtaccagggcatggctccctcctctcaagactaccgcaaagtggat
gatgagtttgaaaatgtctctaaccaacttctgaagcgcacacaagctatgctggataag
tatcgtcacctgctgttcgaagaatcaaggaggctgggtccgtctgcagagatggtgatg
attgataggatgtttatccaggaggaaaagattgccctaaaccaagacaggatacttgcc
aaggagaagccagaggagtttgtggccagctcgtgtatggtgagcagggttgcagacagt
ggtgtgagacctgcagcagtggaactgagctctattaaaaccgggcctgcaacagtggaa
ctgagctctgttaaatctgctgtagcaacagcccatgtagctggcataccagcccctgct
tctaccttagtgactgttgctgccactgctaactctgttcctgtttcctttccccctacc
aaactagtgataaaacaaggaggagggggagcgctggtatcgtggtctactagctgcacc
tccatgcctgcgtcagtggtacggccttgtgcaaaagccacagggctgagctctgagcgc
tgttttggacccacctcatcttctattcattctgcagatgatgatgatgatgatgatgat
gatgcacttcctcagcggactagcaagcctcccatcaagacctatgaggcacgccagcgg
attggcttgaagttgaagattaagcaagaggcagggttcagcaaagtggttcacaacact
gcattagacccagttcatttgcagccacagcacactccactaccacaagtccctgagcca
ccctctaaaacaagaccacctgtaacccaactgtccatagttcaacggacttcaccctcc
tccagtaattccacatgctccatcactttcagtgcagcaacgacacacgcagggtctgga
actacaacttcctcaactgccccccctccttcagtctctcatggcttgtcctcatcctta
tcctcctgcacctcttcagcccaagtaaatggcactctagaacactatgaggtgtctggg
gccaaactgaaccctacctccacttcagcacctcagttgaccacctgccggctcccacta
cgcaagacgtaccgcaaaaatatcagccctcatcaccgaccgggagtgccaggagggggc
aacatgggacccattccaccagcagcacctgcatcttctcctccagtggagaggactgtt
attgccagtgtgaagttggagcagcaaggtgtctgtaagccccctcacactctaactgac
ccagggtcacagggtctggcatctgtagagcatgaattctaccatggaattaaaaatgcc
tatcaacagcagcagcaatcctctgataaagaggatgaggaggatggtaatacaggggac
cacatggggagggtcatggggcagatgagtaaaaaccgtgagtgggcagtgggcacattt
cggatggaccagcatgcaccaggccctccatctcttggtgaaacatcctgggcgagagac
tcatcacttcctgcaaaacgatctaagtctgattccccagacatggacaatgccagcttc
tcgagtggtagccctccactggacaactcgctgaacgaacatctgcagtgtgctatagac
agcatactgaatctgcagcagggcccaccgacccgtggagccgtggacagagtctatgct
ggaaacttaaccaaccagcaccaaacccaccatcgtcagggcacagcatcttcatcaaca
tcattgtatagacactctgtctcttctgcttcctctccatcttcatcctccatttcacag
cacccacagttagggggccgaggacagaatggaaatctggtgtcacagacacatagtaga
taa
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