Ictalurus punctatus (channel catfish): 108264400
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Entry
108264400 CDS
T04658
Name
(RefSeq) transcriptional repressor CTCF isoform X2
KO
K23195
transcriptional repressor CTCF
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108264400
03036 Chromosome and associated proteins [BR:
ipu03036
]
108264400
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108264400
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108264400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
DTHCT
Motif
Other DBs
NCBI-GeneID:
108264400
NCBI-ProteinID:
XP_017321374
Ensembl:
ENSIPUG00000003840
UniProt:
A0A2D0QSV0
LinkDB
All DBs
Position
4:15133844..15141891
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AA seq
804 aa
AA seq
DB search
MEGGQTEAVVDETGDAFKAKDCKTYQRRREDEEVEAELLQAAGLEAVEQPVAEGEVTGAV
VDAQQQLVEGVVSVNSGIEMMVMDSLDPALLQMKTEVMEGTMAAGVSVAGAAHEATVTTV
DDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTATTVEELQGTLVDATAMPKDGEPV
ICHTLPLPEGFQVVKVGANGEVETVEQDELHGHEEQSLQQQQEEEEIPEPQNDDPTWAKD
PDYTPPVKKTKKTKKSKLRYNTEGEKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPK
PTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHL
NTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSH
TGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN
VAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCEAVFHERYALIQHQKSHKNEK
RFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCEKTFRQKQLLDMHFRRYHDPNFVPT
SFVCTKCSKTFTRRNTMARHAENCSGVEGGDGENGAPTKRGRGGRKRKMRSRKDDDDSDD
HGEPDLDDIDEEEEEEDALDDMEMEVEQAPPTIPIPAPAEPPVKRKRGRPPKNPPKASPA
KNTAIAPTATAIIQVEDEGTGAIENIIVKKEQDGMDSSLAASSEPVVEEVEATDGGVEAE
QLSVPEAAPNGDLTPEMILSMMDR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggacagaccgaagccgtagtggatgagacaggggacgctttcaaagccaag
gactgtaagacgtaccaacggcggcgcgaggacgaagaggtcgaagccgagctgttgcag
gccgctggtctggaggcggtagagcagcccgtagccgagggggaggtgaccggtgccgtg
gttgacgcacagcagcagctggttgaaggcgtggttagcgtaaacagcggcatagaaatg
atggtgatggactcgctggatccagccctactacagatgaagacggaggtgatggaaggt
accatggctgctggtgtgagtgtagctggggcagcccacgaggccacagtcaccacagtg
gatgacacacagatcatcaccctgcaggtggtcaatatggaggaacaacaactgggcctg
ggtgaactgcaactagtgcaggtgcccgtttcagctgtgcctgtcactgccaccaccgtg
gaagagctgcagggaaccctggtggatgctactgccatgcccaaagatggagagcctgtc
atctgtcacacgctgccactcccagagggcttccaggtcgtgaaagtaggtgccaatgga
gaagtggagacagtggagcaggatgagctccacggccatgaggagcagtctctgcagcag
cagcaggaagaggaggagattcctgaaccccagaatgatgatcccacttgggccaaggat
cctgactacacacctcctgtcaaaaagacaaaaaagacaaagaaaagcaagctgcgctac
aacacagagggagagaaagacatggacgtgtctgtttacgactttgaggaggagcagcaa
gaaggcctgctctcagaagttaatgcagagaaggtcgtgggcaacatgaagcctccaaag
ccaaccaaaatcaaaaagaagggtgtgaagaagacattccagtgcgagttgtgtagctac
acctgcccaagacgctccaacctcgaccgtcacatgaagagccacacggatgagcggccg
cacaaatgtcacttgtgtggacgtgccttcaggactgtcaccctgctgaggaaccatctc
aacacacacacaggcaccagacctcacaaatgtaccgattgtgacatggcgtttgtgact
agcggtgagcttgtgcgacatcgtcgctataagcatacccatgagaagcccttcaagtgt
tccatgtgtgactatgctagtgtggaggtcagcaagctgaagagacacattcgctctcat
acaggagagcgtccattccaatgcagcctgtgcagctatgccagcagagacacctacaag
ctgaagagacacatgaggacccactcaggcgagaagccgtatgagtgctacatctgtcat
gcacgtttcactcagagtggcactatgaagatgcatatcctgcagaagcataccgagaac
gtggccaagttccactgcccccactgtgacactgtcatcgcccgcaagagtgacttaggt
gtacatctgcgcaagcagcattcctatattgagcaaggcaggaagtgccgttactgtgag
gccgtgtttcatgagcgctacgctctcatccagcaccagaagtcccacaagaacgagaaa
cgcttcaagtgtgaccagtgtgactatgcctgccgacaggagcgtcacatggtgatgcac
aaacgcacccacactggggaaaagccatatgcctgcagccactgtgagaaaactttcaga
cagaaacaacttctggacatgcattttcgtcgctaccatgaccccaactttgtgcccact
tcctttgtgtgcacgaagtgcagcaagaccttcacacgcaggaacaccatggccaggcat
gctgagaactgttctggagtggaaggtggtgatggagagaatggtgctccaaccaaaaga
ggccgtggtggcagaaagaggaagatgcgctccaggaaggatgatgatgacagtgatgat
catggagagcctgatttagatgacattgatgaggaagaggaggaggaagatgctcttgat
gatatggagatggaggtcgagcaagctccaccaactatccctatccctgcccctgctgag
ccgcctgtcaagaggaaacgtggtcgacctcccaagaatccccccaaagcttctcctgct
aagaacacggccatagcacctactgcgactgccattatccaggtggaggatgagggcacg
ggagccattgagaacatcatcgtgaagaaggagcaggacggcatggattcttctttggca
gcgtcatcggagcctgtggtggaggaggttgaagccacagatggaggagtggaggcagag
cagctctccgtccctgaggccgcacccaatggagacctcacccctgagatgatcctcagc
atgatggaccggtga
DBGET
integrated database retrieval system
