Ictalurus punctatus (channel catfish): 108264474
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Entry
108264474 CDS
T04658
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108264474 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108264474 (myo5aa)
04131 Membrane trafficking [BR:
ipu04131
]
108264474 (myo5aa)
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108264474 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108264474 (myo5aa)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108264474 (myo5aa)
mRNA cycle factors
P-body specific factors
108264474 (myo5aa)
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Myosins
108264474 (myo5aa)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108264474 (myo5aa)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108264474 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
DUF5382
HTH_17
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
108264474
NCBI-ProteinID:
XP_053534261
Ensembl:
ENSIPUG00000016577
UniProt:
A0A9F7R318
LinkDB
All DBs
Position
4:34525247..34590096
Genome browser
AA seq
1883 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWRSAELTKDYKQGDTTLHLQLEDGKDLEHKLDPKTKALP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYHIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCASYHLPEFKNLKLSGANEFHYTKQGRNPVIDGVE
DAKEMSTTRNAFTLLGINELYQMGLFQVLAAILHLGNVEVKDRDADSSIIAPNNGHLSVF
CDLLGVAYQDMAHWLCHKKLKTASETYIKPVPRVQAMNSRDALAKHIYAKLFNWIVEHVN
KALHSSVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECRMPRGSDDSWAQKLYNTHLKTCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVNEEQINVLKASKFDLLVELFQDEDKVTS
PTGSGPPPGGRTRLSIKPDKGKPDQASKEHKKTVGLQFRNSLQLLMETLNATTPHYVRCI
KPNDHKYAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVQA
DRKMTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWL
ERKKYLRMKRAAIVIQRYVRGYQARCLAKFLRRTRAAIVIQKYQRMYVQRTSYRRKRNAA
LAMQCILRAYMARQQYKALLREHKAIIIQKMVRGWLARQWYKRSLEAVVYLQCCVRRMRA
KRELKKLKIEARSVEHYKKLNIGMENKIMQLQRRVDEQNKENRVLGERLNNLESAHATES
ERLRRDLTRLRGVEEEAKNSANRVTTLQEELEKLRKDLQTTQKEKKAIEDWAQTYQDEME
KMISELKEQNDLLKNEKDDLNRLIQEQSQQWTERMQRALKEETAQLESDLNEERSRYQNL
LTEHLRLEEKYDDLKEEISLGTNVPKPGHRRTDSTHSSNESEYTYNSEFAESEEGARGAE
DVTKGAALDMALFLKLQKRVTELEQEKQGLQNELDRKEEQFQRARARDDEEHKKARGAEL
EYESLKRQELESENKKLRHNLNEMRQTLAGKDGSMSAYKVLMEQLNSSNEELEVRKEEVL
ILRSQLVSQKEAMQHKETMTEPLHYVEDVHKFTDAKEISQAYMGLKDTNRSPRFQRKPFA
VSELVSRLRSPLPDMRKLNEDGELWLVYEGLKETNRLLESQLQAQRRSHEAELEALRGEL
HCVKEENQRQQQLLTQNLQLPPEARIEASLQHEITRLTNENLDCLLENPKIYRINMLRRI
IDLMEQLEKQDKTVRKLKKQLKVFAKKITDLEGGQVENVSPGQMADEPIRPVSIPRREKD
FQGMLEYKKEDELKLVKNLILELKPRGVAVNMLPGLPAYILFMCLRHADYVNDDQKVRAL
LTSIINSIKKILKKRGDDFETVSFWLANTCRFLHCLKQYSGDEQFMKYNSPKQNDHCLSN
FDLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSS
VADEGTFTLDSIIRQLNSFHGIMCQHGNDPELIKQVVKQQFYIIGAVTLNNLLLRKDMCS
WSKGMQIRYNVSQLEEWLREKNLMVCGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCN
SLSTAQIVKVLNLYTPVNAFEERVSVTFIRTIQNRLRDRKESPQLLLDTKIIYPVTFPFN
PSSLALDSIQLPSSLNLAFLTRV
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccgagctctatacaaagtatgctcgggtgtggatccccgaccctgaggaa
gtgtggaggtcagcagagctcactaaagactacaaacagggggacacaacactgcacctg
cagctcgaagatggcaaggatctggagcacaagctggacccgaagactaaagccctgcct
cacctgcggaaccccgacatcctggtgggagaaaatgacctgacggcgctgagttacctt
cacgaaccggccgtgttgcacaacctgaaagtgcgcttcatcgactccaaactcatctac
acctactgcggtattgtgttggtggccattaatccgtatgaaacgctgcccatctatggc
acggatatcattaacgcttacagcggccagaacatgggagacatggacccgcacatattc
gccgtggctgaggaggcctacaagcagatggccagagacgagaggaaccagtccatcatt
gtcagcggagagtctggcgctgggaagacggtttccgccaaatacgccatgcgatacttc
gctacggtgagcggctcagccagcgaggccaacgtcgaggagaaagtgctcgcctcaaac
cctatcatggaggccataggaaacgccaaaaccaccaggaacgacaacagcagccgcttt
gggaagtacatcgagatcggcttcgacaagcgctaccacatcatcggcgccaacatgagg
acgtacctgctggagaagtcgcgagtcgtgtttcaggcggacgacgagaggaattatcac
atcttctaccagctctgtgcctcctaccaccttcctgagttcaagaatctgaaactcagc
ggtgcaaatgaattccactacaccaaacagggccgaaaccctgtcattgatggagtggag
gatgcgaaggagatgtcaactaccaggaacgccttcacactgctgggcattaacgagttg
tatcagatggggctgttccaggtcctggcagccatcttgcacctgggaaatgtggaggtg
aaggacagagatgcagacagcagcatcatagcgcccaataatggtcacctgagcgtgttc
tgtgatctgctgggcgtggcctatcaggacatggctcactggctgtgccataagaagctg
aagacggcgtctgagacgtacatcaaaccggttcccagagtgcaggccatgaactccaga
gacgctctggccaaacacatctacgccaaactgttcaactggatcgtggagcacgtcaac
aaggcgctgcactcgtccgtcaaacagcactcgttcatcggcgtgctcgacatctacggg
tttgaaaccttcgagattaacagttttgaacagttctgtattaactatgctaatgagaaa
ctccagcagcagtttaacatgcacgtgtttaagctggagcaggaggagtacatgaaggag
cagatcccctggaccctgatcgatttctacgataatcagccgtgcattaatctgatcgag
gctaagatgggcgtgctcgacctgttagacgaggagtgcaggatgccgaggggttcagat
gactcgtgggctcagaagctctataacactcatctgaagacgtgtgcacttttcgagaag
ccgcgcatgtccaataaagccttcatcataaagcactttgcagacaaggtggagtatcag
tgtgagggatttttggagaaaaacaaggacacagtgaatgaagagcagattaatgttctg
aaggccagtaagtttgacctgctggtggagctcttccaggatgaggataaagttaccagc
cctacaggaagtggtcctccccccggggggcgcactcgcctgagcatcaaaccagacaag
ggcaaaccggaccaggccagcaaggagcacaagaagaccgtgggcctgcagttccgtaac
tctctccagctgctgatggagacgctaaatgccacgacgccgcactatgtccgctgcatc
aaacccaacgaccacaaatacgccttcacgtttgacccgaagcgggcggtgcagcagctg
agggcgtgtggagtcctcgaaaccatccgcatctccgctgcaggatttccgtccaggtgg
acctatcaggagttcttcagccgttatcgtgtgttgatgaagcagaaagatgtccaggct
gataggaaaatgacctgcaggaacgttctggagaaactggtgcaggatcaggataagtac
cagtttgggaagacgaagatctttttccgagccggtcaggtggcgtacctggagaaactc
cgggccgataaactccgagcagcctgcatccgcatccagaaaaccatccgctgctggctg
gagcgcaagaagtacctgcgcatgaaacgagccgccatcgtcatccagagatacgtccga
ggataccaggcccgatgcctggcgaagtttctgcgccgcacccgagccgccatcgtcatt
cagaagtaccagcgcatgtacgtacagagaaccagctacaggcgcaaacgcaacgccgcc
ctcgccatgcagtgtatcctccgagcgtacatggcccgacagcagtacaaagcgctgctg
cgagagcacaaagccatcatcatccagaagatggtgcgcggctggttggcgcgtcagtgg
tataagcgctctctggaggcggtggtctacctgcagtgctgcgtgcggcgcatgagggcc
aagcgcgagctcaagaagctgaagatcgaagcgcgctccgtcgagcactacaaaaaactc
aacatcggcatggagaacaagatcatgcagcttcagcgcagagtcgacgagcagaataag
gagaaccgggttctgggtgaacgtctgaacaatttggagagcgcccacgccactgagagc
gagcgtctgcgccgggacctgactcgtttacgcggcgtggaggaggaggcgaagaacagc
gctaaccgagtgaccacgctacaggaggagctggagaaactgcgcaaagatctacagacc
acgcagaaggagaagaaggccattgaggactgggcgcagacctaccaggacgagatggag
aagatgatctcagagttaaaggaacagaatgatctgttgaagaacgagaaggacgacctg
aaccgtctgatccaggagcagagccaacaatggacagagaggatgcagagggctctgaag
gaggagacggctcagctggagagcgatttaaacgaggagagatcacgatatcagaacctc
ctcaccgagcacctgagactggaggagaaatacgacgatctcaaggaggagatctcactc
ggcacgaacgtccccaaaccgggccacaggagaaccgactccacacacagcagcaacgag
tccgaatacacctacaactccgagttcgccgaatccgaggagggagcgcgaggagccgag
gacgtgaccaaaggagcagcgttggacatggctctgttcctgaagctgcagaagcgagtg
acggagctcgagcaggagaaacagggcctgcagaacgaactggaccgaaaagaggagcag
tttcagcgggctagagccagggacgacgaagagcataagaaggctcgcggcgctgaactg
gagtatgaatctcttaagcgtcaggagctggagtcggagaataagaagctgagacacaac
ctgaacgagatgcgtcagactctggcggggaaagacggctccatgtcggcctacaaggtc
ctgatggagcagttaaactcctccaacgaggagctggaggtccggaaggaggaggtgctc
atcctgcgctcacaactcgtcagccagaaagaagccatgcagcacaaggagaccatgacc
gagccgctgcactatgtggaggatgtccacaaattcacagatgctaaagagatctctcag
gcttacatgggcctcaaggataccaacagatcccccaggtttcagcgcaagccgttcgca
gtgagcgagttggtcagtaggctgagatcccctctccctgacatgcgtaagctgaatgag
gatggagagctgtggctggtgtatgagggcttgaaggagaccaacaggttgttggagtct
cagctgcaggctcaacggcgctcccatgaggccgagctggaagcgctgcgtggtgaactg
cactgtgtgaaggaggagaaccagagacagcagcagctcctcacacagaacctgcagctt
cctcctgaggctcgcatcgaggccagtctacagcacgagatcacacgcctcaccaacgag
aacctggactgtctacttgagaatccaaagatctacagaatcaacatgctgcgcaggata
attgacctcatggaacagctggagaaacaggacaagacggttcgcaagctgaagaagcag
ctcaaagtgttcgccaagaagatcaccgacctggaaggtggtcaggtggagaacgtgtct
ccgggtcagatggccgacgagccgatccgtccggtcagcattccacgccgagagaaagac
ttccagggaatgttggagtacaagaaggaggacgaactcaagctggtcaagaacctcatc
ctggaattaaagcctcgcggcgtggcagtgaacatgctgcccggtttgcctgcgtacatc
ctcttcatgtgtttacgacacgccgactacgtcaacgacgaccagaaagtccgggcgctg
ctcacctccatcatcaacagcatcaagaagatcctcaaaaagcgaggtgatgactttgag
accgtttcgttctggttggcgaacacatgccgcttcctgcactgtctgaaacagtacagc
ggagacgagcaatttatgaagtataacagtccgaagcagaatgatcactgtctgtccaac
tttgatctggctgagtatcggcaggttctcagtgatctggccattcagatttaccaacag
ctcatcaagtgtatggagaatatcctgcagcccatgatcgtctccgggatgctagagcac
gagaccatccagggtgtgtcaggcgtgaagcccaccggtctgcgcaagaggacgtccagc
gtagctgatgagggaacgttcacgctcgactccatcatccgccagctcaactctttccac
ggcatcatgtgtcagcatggcaacgaccccgagctcattaagcaggtcgttaagcagcag
ttctacatcatcggcgcggtcacactcaacaacctgctgctgcgcaaagatatgtgctcc
tggagcaagggcatgcagatcaggtacaatgtgagccagttggaggagtggttgagggag
aagaacctgatggtttgtggagcgaaggagacgctggagccactgattcaggcagcgcag
ttactccaggtcaagaagaagacagatgaggacgctgaggccatctgctccatgtgtaac
tcactgagtactgctcagattgtcaaggtgttgaacctgtacactcctgtcaacgcgttt
gaagagagagtgtccgtaacgttcatacgaaccatacagaatcgcctgagggatcgtaag
gagtctcctcaactcctcctcgacacaaagatcatctaccccgtgacgttccccttcaac
ccgtcctccctcgccctggacagcatccagctcccgtccagcctcaacctggcattcctc
actcgcgtctaa
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integrated database retrieval system
