Ictalurus punctatus (channel catfish): 108264491
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Entry
108264491 CDS
T04658
Name
(RefSeq) long-chain fatty acid transport protein 2 isoform X1
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108264491
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108264491
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108264491
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108264491
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108264491
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
108264491
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
108264491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Gemini_mov
Motif
Other DBs
NCBI-GeneID:
108264491
NCBI-ProteinID:
XP_047009489
Ensembl:
ENSIPUG00000017141
UniProt:
A0A979EMD2
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Position
4:35424518..35434381
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AA seq
622 aa
AA seq
DB search
MNNMETVCAALVVVLILILLFFVKFPYFLHDCVFIMKTLGIRSKRMKFRGSSPFYTVLDC
FLDAVHRHPHKPFLVFEDDVYTYLQVDRWSNRAAHALHTHTTLRQGDTATLLLGNEPNFI
FLWLGLLKIGCSISLLNTNIRGKSLMQCFLCCESKVLIAGEEYRSAVCEVLPELRERGVC
VFLLSDWCDIDGLQSLKDKMDNSDDGPVSRTLRANVTMRSPAAYIYTSGTTGLSKAGVIL
HDRIWSGTFFQSLFGVKHDDVIYIPIPLYHAAGLIIGLLGAIERGSTVVLRRKFSVSQFW
SDCRKYNVTVIQYIGEIMRYLCNTPKRETDRQHTVRMAIGNGLRTDIWQEFQRRFGVKHI
KEFYGASDGNIGFLNYTGKVGAVGKVNFLSRKLTPHALIQYDPETEQPVRDSRGRCVPVL
TGETGLLVCKITEFTPFEGYAGNPEQTEKKKLRNVFEEGDVYLNSGDLMRMDHQGFIYFQ
DRVGDTFRWKGENVATTEVADIISVMDFVKDVSVYGVEVPGHEGRVGMAALTLKEKREFD
CKKAFNHVTNFLPAYARPRFIRILRSMELTGTFKQVKTFLMKDGFDPDRVAPPIYFLQET
SESYVPLTHTHYNAIMSGKIHV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatggagacggtgtgcgctgcgcttgttgtggttctaatcttgattttgctg
tttttcgtgaagtttccgtatttcctgcatgactgcgtgttcataatgaaaacccttggg
atcaggtcaaagcgcatgaagttccgtgggagttctccgttctacacggtgctcgactgc
tttctggatgcagtgcacagacacccacacaaaccctttcttgttttcgaggatgatgtg
tacacatacctgcaggtggaccgctggagcaacagggcagcacacgcactgcatacacac
accacgctgcgccagggagatacggccacgctgctcctgggcaatgaaccaaacttcatc
ttcctctggctcggactcctgaagatcggatgttctatctcgcttctcaacaccaacatt
cgggggaaatcactaatgcagtgcttcctgtgttgtgagtcaaaagttctgattgcaggg
gaagagtatcggagtgcagtgtgtgaggtgctgccagagttacgagaacgtggcgtgtgt
gttttcctgttgtccgattggtgtgacatagatggacttcagtctctgaaagacaagatg
gacaacagtgacgatggacccgtgagtcgcacgctgagagctaacgtcactatgaggagc
cctgctgcgtacatctatacatcaggaactacaggtctctctaaagcaggtgttatactt
cacgaccgaatatggagtggtactttcttccagtctctgtttggtgtcaagcacgacgat
gtcatctacatccccatccccctctaccatgctgcaggactgatcattggcctgctgggg
gcaatagagaggggaagcacagtggtgttgaggaggaagttctcagtgtctcagttctgg
agcgactgcaggaagtacaatgtgacggtcatccagtatatcggagagatcatgcgctac
ctctgtaacacacccaagagagagacagaccggcagcacacggtgcgaatggccatcgga
aacggacttcgcactgacatctggcaagaatttcagcgcaggtttggtgtgaaacacatt
aaagagttctacggtgcctctgacgggaacattggcttcttgaactacacggggaaagtg
ggcgctgtgggcaaagtgaacttcctctccaggaaactgacccctcatgcactgattcag
tacgaccctgagacagagcagccggtgcgggacagcagggggcgctgtgtccccgtcctt
acaggtgaaacagggctcctggtgtgtaagatcactgagttcactccgtttgaggggtac
gcaggaaatccggaacaaacagagaagaagaagctgcgtaatgtgtttgaggagggagat
gtttatctgaacagtggagacttgatgaggatggaccaccagggcttcatctacttccag
gaccgggttggagacactttcagatggaaaggagagaacgtggccaccactgaagtggct
gacattatttcagtgatggattttgttaaagatgtgagtgtgtatggtgtcgaggttcca
ggtcacgaggggcgtgtcggcatggcagcactgacactaaaggaaaagagagagtttgac
tgcaaaaaagctttcaatcacgtcaccaacttcctgcctgcgtacgctcggccacgcttc
atacgcatcctgaggagcatggagctgactgggacatttaaacaagtgaaaacctttctg
atgaaggatggatttgatcctgatagagtggctccgcccatttacttcctgcaggagacc
agcgagagctatgtccccctcacacacacacactacaacgctatcatgtcagggaagatc
cacgtctga
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